Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00054 ATGACAACAAATCACAACATGGCAACAAATAGCAATCTGAAGAATGCTGCTATAGCATTCTTGGTCCCTCTGCCCTCCATCCTAGTTTATCTCTCGTTCCATTCGGCCATTAGTGGCTTTCCACACTCTCCATCTTCTCCGTCAACTCTTTGGACATGGTGTTATCACCATCCTTTACTATTTGCCAATGTCCTTTTCTTCTTCAATGTCAATCTGCTCTTCTGGCTCATCGGCCTAATCCAATCCAGCCACTGGATGATCGACCCGTATTGGACAGTGATACCTGTGATGCTTGTTCATTACTATTCGACTCATCCTTTGGCTCAGTATAACTGGTTGAGGTCGAGGACGGTGATTCTGTTGACTTGGGTTTGGAGTATCAGGCTGATCCACAACTACTTCAGGCGAGAAAAGTGGCAGTGGGGTGCCAGGGAGGATTGGCGTTTCACTGATTTGAGCCATCAGTATGGAAAGCATTGGTGGTGGGCTTCCTTCTTCGCCATCTACGTGCCTCAGCAGGTGTTTCTGATTGGACTATCATTTCCATTCTATGTTATCCACTCGGTCAACGAGCCTCTGAGCATGTGGGACTTTGTAGCCATAGTTTTGTGTATATCTGGTGTTGTCATAGCATACATTGCTGATACTCAGCTTTACAACTTTGTGAGTGGAAAGAAGGAGCTAAAAGAGGCAGGTAAGGCAGAGGTTGTCATTCTTGAGAAAGGGTTGTGGTATTACTGTCGGCATCCAAACTACTTTGGAGAGCAGTTGTGGTGGTGGGGAGTGTTTGTGTTTGCATGGAAGCTGGGACATGGATGGACCTTCATAGGAGCTTTGGCCAATAGCATGTGTTTGGGTTATGTGACAAAGCTTGTGGAGGAGAGAATGTTGAAACAAGAGAGCAGAGAAGAGGCCTATAGGCTTTATCAGAAGACAACTTCCACATGGGTGCCTTGGTTCAAGTTCTCTCCTTTGGAACTCAAATCTAAGGATCTTTGA 999 0.4575 MTTNHNMATNSNLKNAAIAFLVPLPSILVYLSFHSAISGFPHSPSSPSTLWTWCYHHPLLFANVLFFFNVNLLFWLIGLIQSSHWMIDPYWTVIPVMLVHYYSTHPLAQYNWLRSRTVILLTWVWSIRLIHNYFRREKWQWGAREDWRFTDLSHQYGKHWWWASFFAIYVPQQVFLIGLSFPFYVIHSVNEPLSMWDFVAIVLCISGVVIAYIADTQLYNFVSGKKELKEAGKAEVVILEKGLWYYCRHPNYFGEQLWWWGVFVFAWKLGHGWTFIGALANSMCLGYVTKLVEERMLKQESREEAYRLYQKTTSTWVPWFKFSPLELKSKDL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00054 332 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 200 269 IPR001104 GO:0006629|GO:0016627
Vimu10g00054 332 Gene3D - 111 320 - -
Vimu10g00054 332 Pfam Protein of unknown function (DUF1295) 74 313 IPR010721 -
Vimu10g00054 332 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 47 321 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00054 Vimu-Chr10 337943 339924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00054 - - gmx:100807179 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00054 10 337943 339924 Vimu11g03179 11 51157840 51159690 PCT