Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03169 ATGCACATGGACTCCTCCTCCGACGAGGAGGACGACCGCCGCAACCTCGTCGATCAGAACCACCGCAAACCTCCGTCTCCGTCCCCGGCCGCCGTCTTTCACGTCGAAGATCGCTCTCCGCGCTTCTTCCACCGGAATTTCATATACCAGAAGAAGTACATTGTCGCAATCCTCGCTTTCCTCCTCGTCATCCTTTTCTTCTCCGTCGCCGATTTCCACAGTATCTTCTCAAGCTCTTCCTTCCAATTCGATTCCGTCTCTGATCGAATGAAGGAATCTGAATTGCGCGCCATTAACCTCTTGCGGCGACAGCAACTAGGACTCTTAGCCGCGTGGAACGCCACACGTGGGTCCAACGCGTCGGATCCGAACCAATTTGAGGATCTGAAATCTGTGTTGTTCAAGCAGATTTCCCTCAACCAAGAGATTCAGCAGGTTCTGTTGAACCCACATTCCACAGGGAACATAGTTGAGCCCGAGTTCGATTTAAACGCTACTCTGAACGGCGTTGTTTACGATAGGTGTAGAACGGTGGATCAGAATTTGTCGCAGAGGAGAACCATCCAGTGGAACCCTAGGGATGGTAAATTTTTACTTGCTATATGCGTGTCTGGGCAAATGTCTAACCATTTGATTTGTTTGGAGAAACATATATTTTTCGCTGCTTTGCTAAATAGGGCTTTAGTGATTCCTAGTTCCAAGGTGGATTACCGGTACGATAGAGTTGTGGATATTGATCGCATTAACAAGTGCTTGGGGAAGAAAGTGGTGTTTTCGTTTGAGGAGTTTTCGAATTTAAAGAAGGGTCACATGCACATTGATAAGTTTTTGTGTTACTTTTCGAAGCCTACGCCTTGTTACTTGGACGATGAATGGTTGAAGAAGTTGGGGGGTTTAGGTGTGACTATGAATAAACAAGAAGCCGTGTGGGATGAGGATACCCGGAATCCGAAGAGCAAGACGGTTCAGGATGTGCTGGGGAAGTTTAACTATGATGATGATGTTATGGCAATTGGGGATGTGTTCTATGCTGAAGTGGAGCCAGAATGGGTAATGCAACCTGGTGGGCCAATTGCACACCAATGCAAGACTCTCATTGAACCTAATCACCTTATTTCTCTCACTGCCCAACGGTTTATTCAGACATTTCTCGGAAGGAACTTCATTGCATTGCATTTTCGAAGACACGGGTTTTTGAAATTCTGTGCCATGGACCATTTTCTCATATTACTTGAGTATGATATACATTATGTAAGTTCTGAACTTTGCATGCGTGGCCTGGTTGTTTGTGACAAGTCAGTTGCTAGCAGCATTTTCATGTCTACATTTCGAAATTCTGCAATTTGTAATGCTAAAAAGCCAAGTTGCTTTTACCCCATTCCTCAAGCTGCAGATTGCATCTTGAGGGTGGTTGAAAGAGCTGATGCGCCTATTATATATCTTTCTACGGATGCAGCAGAAAGTGAAACTGGACTGCTTCAGTCTCTGGTAGTGCTGAATGGCAGGCCTGTTCCTCTTGTAATGCGTCCAGCTCGAAATTCAGCAGAAAAATGGGATGCTCTGTTGTACAGGCATGGTTTGGAAGGAGATACACAGATTTCCCTTTGTGTTAGCCAATGGGAGCAAATCATGCACATGACCTTATATGTAAAGACGGAGACAATGAACGTAGATGAAGGGAACACTGTTTTTACCACTCTTAATTTCTTCACTGACGTGCATGTGAATATTTTCTTGCTGAAGGTGGAAGCTATGCTGGACAAGACTATATGTGCCATGTCTAGCGTGTTCATCGGAGCCCCTGGTTCCACTTTCACCGAAGACATCCTGCGGCTGAGAAGGGGCTGGGGATCCGCATCGATATGTGATGAGTATCTTTGCCATGATGAAGAACCAAACATTGTAGCGGAAAATGAATAA 1920 0.4552 MHMDSSSDEEDDRRNLVDQNHRKPPSPSPAAVFHVEDRSPRFFHRNFIYQKKYIVAILAFLLVILFFSVADFHSIFSSSSFQFDSVSDRMKESELRAINLLRRQQLGLLAAWNATRGSNASDPNQFEDLKSVLFKQISLNQEIQQVLLNPHSTGNIVEPEFDLNATLNGVVYDRCRTVDQNLSQRRTIQWNPRDGKFLLAICVSGQMSNHLICLEKHIFFAALLNRALVIPSSKVDYRYDRVVDIDRINKCLGKKVVFSFEEFSNLKKGHMHIDKFLCYFSKPTPCYLDDEWLKKLGGLGVTMNKQEAVWDEDTRNPKSKTVQDVLGKFNYDDDVMAIGDVFYAEVEPEWVMQPGGPIAHQCKTLIEPNHLISLTAQRFIQTFLGRNFIALHFRRHGFLKFCAMDHFLILLEYDIHYVSSELCMRGLVVCDKSVASSIFMSTFRNSAICNAKKPSCFYPIPQAADCILRVVERADAPIIYLSTDAAESETGLLQSLVVLNGRPVPLVMRPARNSAEKWDALLYRHGLEGDTQISLCVSQWEQIMHMTLYVKTETMNVDEGNTVFTTLNFFTDVHVNIFLLKVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRRGWGSASICDEYLCHDEEPNIVAENE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03169 639 MobiDBLite consensus disorder prediction 1 31 - -
Vimu11g03169 639 MobiDBLite consensus disorder prediction 1 20 - -
Vimu11g03169 639 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 80 639 IPR045130 GO:0036066|GO:0046922
Vimu11g03169 639 Gene3D - 367 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03169 Vimu-Chr11 51042615 51047179 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03169 K03691 - gmx:100776069 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03169 11 51042615 51047179 Vimu11g03169 11 51042615 51047179 ECH
Vimu10g00046 10 300986 302948 Vimu11g03169 11 51042615 51047179 PCT