Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00046 CCTCCTCCTCTTCCTCCTCCGGTGACCGGTCACCGCCAGGCAGCAATGGAAAGGGATTCATCTTCCGACGAAGTAGACGAGTTCATCCATCGGAAGGAGAGGAATGCGCCTACATCTCCCTCTTCCTTCCATTTCCAACCCCTCACTGCGCGAATCACTTCCAACTTCAACTTCCCTTTTCAGAAGAGATACCTCTTCGCCATTCTCCCTCTCTTCGCAATCCTCCTCTACTACGTCATCCCCGATTCTCACTCGCTCTTCTCCCTCTCCTCCGTCAACCTCAATCTCCGCCACCATCAACCCGAGGAATCTCAATTGCGCGCCCTTTACCTTTTGCGCCAACAGCAATTAGGGCTTCTCCACGCTCTCAATTCCACTTCCCAAACTCCCACTCTCAAATCCCTTCTATCCAACCAGATTTTCCTCAACTCACAGATTCAGCAGCTTCTTCTCAGTCCCTACACCCCTGCCACCTCTCTCTATTTTCGGAACGCCTCGTGTGGAACAGTGGATCAGAACCTGCGAGAAAGGAGGACCATCGAGTGGAGGCCCAAGGCTAATAAATTTTTGGTTGCAGTGTGCGTCTCGGGGCAGATGTCTAACCATCTGATGTGCTTGCAGAAGCACATGTTCTTCGCGGCTCTCCTTAACCGGGTCCTGGTTATTCCTAGCTCCAAGGTGGATTATGAGTACGAGAGAGTATTGGATGTGGAGCACATGAATAAATGCATTGGAGGTAAAGTCAAAGCAGTGATCTCCTTCCAAGAGTTTTCTAGTATGAGGAAGAATGGCAAGCACGAGGGTAAATTCTTGTGTTATTTTTCGCTGCCTCGACCCTGTTGTCTTGACGAAGAGCATTTGAGGAAGTTGAAATCGTTGGGGCTTTTGTCTACGAATAGGCCTGCGACTGTGTGGGATGAAGATTCGAGGAAGCCCAGAACGAGGAGCGTGAAAGAGGTTGTGTCAAGGTTTTCACGGGAGGAAAAGGAGGATGTTTTAGCCATTGGGGATGTATTGTATGCAGATGTGGAGGAAGAATGGGTGACGCAAGCAGGTGGTCCATTGGCTCATCGATGCAAGACTCTGGTTCAACCCAACCGTCTCATTTTCCTCACCGCTCAACGTTTTATCCAAACCTTCCTCGGCAGGAACTTCCTTGCATTGCATTTCCGAAGACACGATTTCTTGAACTTCTGTAATGGTAAAAAACCAAGTTGCTTTTATCCTATTCCTCAAGCAGCAGATTGTATCTTGCGTGTGGTTGAAAGAGCCAATGCACCCCTCATTTACCTCTCTACAGATGCCGCAGAGAGTGAAATTCGGCTGCTTCAGTCACTGCTTGTGAGAGAGGGCAGGCACGTTCCACTTGTCAAACGCCCACCTCGGAATTCGGCAGAAAAATGGGACTCTTTGTTGTACAGGCATCACATTGAAGGAGACCCTCAGGTGGAAGCTATGTTGGACAAGACTATATGTGCCATGTCTAGTGTGTTCATTGGAGCATCCGGTTCAACTTTCACCCAGGACATTCGACGGCTAAGAAAGGACTGGGGATCCGCATCATTGTGCGATGAGTACCTTTGCCACGGTGAGGAGCCAAATGTTGTAGCGGAGATGGAATGA 1623 0.4941 PPPLPPPVTGHRQAAMERDSSSDEVDEFIHRKERNAPTSPSSFHFQPLTARITSNFNFPFQKRYLFAILPLFAILLYYVIPDSHSLFSLSSVNLNLRHHQPEESQLRALYLLRQQQLGLLHALNSTSQTPTLKSLLSNQIFLNSQIQQLLLSPYTPATSLYFRNASCGTVDQNLRERRTIEWRPKANKFLVAVCVSGQMSNHLMCLQKHMFFAALLNRVLVIPSSKVDYEYERVLDVEHMNKCIGGKVKAVISFQEFSSMRKNGKHEGKFLCYFSLPRPCCLDEEHLRKLKSLGLLSTNRPATVWDEDSRKPRTRSVKEVVSRFSREEKEDVLAIGDVLYADVEEEWVTQAGGPLAHRCKTLVQPNRLIFLTAQRFIQTFLGRNFLALHFRRHDFLNFCNGKKPSCFYPIPQAADCILRVVERANAPLIYLSTDAAESEIRLLQSLLVREGRHVPLVKRPPRNSAEKWDSLLYRHHIEGDPQVEAMLDKTICAMSSVFIGASGSTFTQDIRRLRKDWGSASLCDEYLCHGEEPNVVAEME 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00046 540 CDD O-FucT_like 354 514 - -
Vimu10g00046 540 Pfam GDP-fucose protein O-fucosyltransferase 229 515 IPR019378 -
Vimu10g00046 540 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 101 538 IPR045130 GO:0036066|GO:0046922
Vimu10g00046 540 MobiDBLite consensus disorder prediction 1 25 - -
Vimu10g00046 540 FunFam O-fucosyltransferase family protein 359 528 - -
Vimu10g00046 540 Gene3D - 359 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00046 Vimu-Chr10 300986 302948 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00046 K03691 - gmx:100776069 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00046 10 300986 302948 Vimu11g03169 11 51042615 51047179 PCT