Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03092 ATGGGAATAGCGTTCAGCCGTGATGCCAGGGTGGTGTTCCTCAGCTGGATGCAAAATAAACTTGGTGGAAAACATGACAACAGAAAACCAAATACACACACAACTACTACATATCATGCAAAACAAGAACCTCGAGAGGAATTCAGTGATTGGCCTCATGGTTTGCTAGCAATTGGAACATTTGGAAATAACAGTGAAATCAAAGAAAACTTAGATGACCAAAATGTGCAAGAGGATCCATCCTCCTCAGAGGAAATAGCAGACTTCACTCCTGAAGAAATTGGGAATCTACAGAAGGAATTAACCAAACTCCTGAGACGAAAACCAAAGGTTGAAAAGGAAATTTCTGAGCTTCCCCTGGAAAGATTTCTTAACTGCCCTTCAAGCTTGGAGGTTGATAGGAGAATCAGTAATGCGCTATGCAGTGAATCAGATGATAAAGAAGAAGATATCGAGAAGACATTGAGTGTGATAATTGACAAATGCAAGGACATATGTGCAGATAACAGAAAGAAAACAATTGGGAAAAAATCTATTTCTTTCCTTCTGAAGAAGATATTTGTTTGCAGAAGTGGATTTGCTCCCACGCCTAGCCTTAGAGATACCCTTCAAGAGTCAAGAATGGAGAAGCTTTTGAGGACAATGCTTCACAAGAAAATTTACACCCAAAATTGTTCTCGGACATCATTCATGGCAAAGTGCATAGAGGAGAAGAAGATGACAAGGAAGAGGAGTGATGATGAATCAGATGAGAGAAGTGGTGATGGCAGTAAATGGGTGAAGACTGATTCTGAATATATTGTGCTGGAGATATAA 816 0.3983 MGIAFSRDARVVFLSWMQNKLGGKHDNRKPNTHTTTTYHAKQEPREEFSDWPHGLLAIGTFGNNSEIKENLDDQNVQEDPSSSEEIADFTPEEIGNLQKELTKLLRRKPKVEKEISELPLERFLNCPSSLEVDRRISNALCSESDDKEEDIEKTLSVIIDKCKDICADNRKKTIGKKSISFLLKKIFVCRSGFAPTPSLRDTLQESRMEKLLRTMLHKKIYTQNCSRTSFMAKCIEEKKMTRKRSDDESDERSGDGSKWVKTDSEYIVLEI 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03092 271 PANTHER OS03G0406300 PROTEIN 13 271 IPR044683 GO:0009630|GO:0040008
Vimu11g03092 271 Coils Coil 94 114 - -
Vimu11g03092 271 MobiDBLite consensus disorder prediction 23 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03092 Vimu-Chr11 50430943 50435075 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03092 - - gmx:100811893 454.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03092 11 50430943 50435075 Vimu11g03092 11 50430943 50435075 ECH
Vimu10g00017 10 134826 141128 Vimu11g03092 11 50430943 50435075 PCT