Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00017 ATGAATGAATATCTTTTTTGTCATTTGCCTCAGTTCCTCAGCTGGATGCAAACTAAAATTGCTGGAAAACAAGATAACAGAAAACCAGACACTTATACAACTACTACTTATGATGGAAAACAAGAGGGTCGAGAAGAGTTCAGCGATTGGCCTGATGGTTTACTCGCAATTGGTACATTTGGAAATAATAAGGAAGCAATGGATAAACACATCACTAATAAAGAGGAACCATCTTCCTCTGAGCAAATTCCTGACTTCACTCCTGAAGAAATTGGGAAGCTACAAAAAGAGCTCACTAAACTGTTGAGACAAAAACCCAAAGTGGAAAAGGAAATCGCCCACCTTCCTCTCGACAGATTCCTCAATTGTCCATCAAGCTTGGAGGTTGATCGGAGAATCAGCAATGTACTTTGCACAGATTCTGAAAATAAAGATGACGACGACATAGAAGAAAAACAAGAACGAGAAGAAGATGATGATGAAGAAGACATTGAGAAGACTCTCGGTGTCATACTTGGCAAATTCAAAGAGATTTGTGCAAAAAACAGTAAGAAAGCAATTGGGAAGAAATCAATTTCGTTTTTGCTGAAGAAGATGTTCGTTTGTAAAAGTGGTTTTTCCCCAACACCCAGCCTTAGAGATACCCTTCAACTACAGGAGTCAAGAATGGAGAAGCTTTTGAGGACGATTCTCCACAAGAAAATAAACTCCCAGCATTCTTCTCGAGCACTGTCCCTGAAGAAGCGACTGGAAGACAGGAGGAAGATGCCGATGGAGGAGGAAGCAGAGGCTGAAACTGATGATGGCGGTAAATGGGTCAAGACTGATTCTGAATGTCAGGAGAAATCCTCAGGTCATGGGTTGCAAGCTTTGCGATGGAAATTGGATTATCAAGTTGATAATTCTTTGGCTGCTCAGGATGTCCTCGACCTTGGTTGTGGGGGTTGCATCTTCCTCGACTTCGACCTCGGTCGGGGTAGTTGCCCTGTCCTCGTCCTCAACGGCACACATTTTGGTGAGTTCGTCTATAGAAGAGGTTTGTTGTGGCTCGAGGAGCTGAATAAGCTCTAA 1071 0.4267 MNEYLFCHLPQFLSWMQTKIAGKQDNRKPDTYTTTTYDGKQEGREEFSDWPDGLLAIGTFGNNKEAMDKHITNKEEPSSSEQIPDFTPEEIGKLQKELTKLLRQKPKVEKEIAHLPLDRFLNCPSSLEVDRRISNVLCTDSENKDDDDIEEKQEREEDDDEEDIEKTLGVILGKFKEICAKNSKKAIGKKSISFLLKKMFVCKSGFSPTPSLRDTLQLQESRMEKLLRTILHKKINSQHSSRALSLKKRLEDRRKMPMEEEAEAETDDGGKWVKTDSECQEKSSGHGLQALRWKLDYQVDNSLAAQDVLDLGCGGCIFLDFDLGRGSCPVLVLNGTHFGEFVYRRGLLWLEELNKL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00017 356 Coils Coil 91 111 - -
Vimu10g00017 356 PANTHER OS03G0406300 PROTEIN 12 279 IPR044683 GO:0009630|GO:0040008
Vimu10g00017 356 MobiDBLite consensus disorder prediction 248 273 - -
Vimu10g00017 356 MobiDBLite consensus disorder prediction 143 163 - -
Vimu10g00017 356 MobiDBLite consensus disorder prediction 24 45 - -
Vimu10g00017 356 MobiDBLite consensus disorder prediction 140 163 - -
Vimu10g00017 356 MobiDBLite consensus disorder prediction 24 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00017 Vimu-Chr10 134826 141128 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00017 - - gmx:100814844 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00017 10 134826 141128 Vimu11g03092 11 50430943 50435075 PCT