Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g03031 ATGTGTTATATTTCTCTGATATTGGCAATGTTTACTGCAGATTTACAGTCATCACTTGAGTCCAAGAACGATGGTTCTAAGGAAGAGGGTTTATCTTTTAATGGGCCCTCCTGTGCTCCTTCTACTCATATTTTATTTAAGACTCCTGAAGAAACTGTGTCGGTTGGGGAAACAAAGTCTGTAATTTCACGTGGAAGACAAGGTAGTTCTACATCAACCTCTGGTCCGGGTCTATCACCAAGTTCTTCGGTTGGTTCCCTGTCTTCGGAAAAGTCAACTCTGAATCCCTATGCCAAGGAGTTCAAACTGAACCCCAATGCAAAGAGTTTTATGCCATCCCAAGCACATTCTAGGCCCCGCTCCCCGGTGTCTGATGGTTCCTTTTATTACCCAGCTACTGTATCTACCGTACCAAATATGCCAGCCATGCCTATGGGTATTGGAGTTGGAACTACTTTTGCTGGGCCACAACCTGTCATGTATAATCCACAAGTGGCACAAATGCCATCACAACCATATTTTTATCCAAACGGACCACAGTATGGACAACTTCTGGGTCATCCTAGGCAAGTTTTATATGTGCCAAGCTTCCAACCTGATAAGTTCTCTGGTCAGCATTTTGGAAACTCAATCTTCCAATTTTTTTTACAGGAGATGCCGTATAAAGGACGGGATTATTGA 681 0.4317 MCYISLILAMFTADLQSSLESKNDGSKEEGLSFNGPSCAPSTHILFKTPEETVSVGETKSVISRGRQGSSTSTSGPGLSPSSSVGSLSSEKSTLNPYAKEFKLNPNAKSFMPSQAHSRPRSPVSDGSFYYPATVSTVPNMPAMPMGIGVGTTFAGPQPVMYNPQVAQMPSQPYFYPNGPQYGQLLGHPRQVLYVPSFQPDKFSGQHFGNSIFQFFLQEMPYKGRDY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g03031 226 PANTHER ATAXIN 2-RELATED 34 199 IPR045117 GO:0003723
Vimu11g03031 226 MobiDBLite consensus disorder prediction 53 90 - -
Vimu11g03031 226 MobiDBLite consensus disorder prediction 49 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g03031 Vimu-Chr11 49927284 49928976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g03031 - - gmx:100796073 278.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g03031 11 49927284 49928976 Vimu11g03031 11 49927284 49928976 ECH
Vimu4g00376 4 2658882 2691373 Vimu11g03031 11 49927284 49928976 PCT