Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02935 ATGACTGAGATTATGGTCATTTTTGACTTTGACTCAACAATCATTGAGTGTGACAGTGATAATTGGGTGCTTGATGACACTGCTTTAACTCAAAAGTTCTACCAGCTTCTTCCTACCATGCCTTGGAACCCTCTCATGGATAGAATGATGAAAGAACTCCATTCACAAGGAAAAACCATTGAAGACATTGTTGAAATTCTGAAGAGGACACCAATACATCCTTGCATTGTTCCTGCTATTGAGGCAGCTTATTCCCTTGGGTGTGATTTGAAGATTGTGAGTGATGCAAATAGTTTCTTCATTGAGACAATTCTGCAGCATCATGGAATGTGGAACTGTTTCTCAGAGATCATTTGCAACCCCAGCTATGTCAAAGAAGGGAGTCTCAACATTTGTCCATACCATGATTATCTAAAATCTTCCCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGATCCAAAAGTCGCTGGCAGAAGCAGGAAAGAAGAAAGTGATCTATGTTGGAGATGGAAATGGAGATTTTTGCCCAAGTTTGAAGCTAAAAGAAAGTGACTTTTTGATGCCAAGAACAGGCTTTCCACTGTGTGATTTAGTTTCAAAAAACTGCAATCAGATAAAGGCAGAAGTTCATGGTTGGAGAGATGGGAAAGAGCTTCAACATGTTCTACTAAATCTCATCAACAAAGCTATTGAAGAAGGAAACAACACCATTAACAATAATACTCTTCAAACAATCTCAGTTGATTGCAAGTTGCTGTCAACTCCAATTCCAATTGACACTCATCAACCTTTGCCAAAAGCTCTCTCAGTTCCTCAATAA 843 0.3915 MTEIMVIFDFDSTIIECDSDNWVLDDTALTQKFYQLLPTMPWNPLMDRMMKELHSQGKTIEDIVEILKRTPIHPCIVPAIEAAYSLGCDLKIVSDANSFFIETILQHHGMWNCFSEIICNPSYVKEGSLNICPYHDYLKSSHGCNLCPPNMCKGLVIERIQKSLAEAGKKKVIYVGDGNGDFCPSLKLKESDFLMPRTGFPLCDLVSKNCNQIKAEVHGWRDGKELQHVLLNLINKAIEEGNNTINNNTLQTISVDCKLLSTPIPIDTHQPLPKALSVPQ 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02935 280 Gene3D - 1 190 IPR023214 -
Vimu11g02935 280 NCBIfam MtnX-like HAD-IB family phosphatase 4 197 IPR006384 GO:0016791
Vimu11g02935 280 PIRSF PLP_phosphatas_PHOSPHO2 1 238 IPR016965 GO:0016791
Vimu11g02935 280 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 240 IPR016965 GO:0016791
Vimu11g02935 280 SUPERFAMILY HAD-like 4 185 IPR036412 -
Vimu11g02935 280 Pfam Putative Phosphatase 4 234 IPR016965 GO:0016791
Vimu11g02935 280 NCBIfam HAD-IB family phosphatase 6 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02935 Vimu-Chr11 49113386 49115456 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02935 K13248 - gmx:100785357 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00308 4 2279223 2280956 Vimu11g02935 11 49113386 49115456 PCT