Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02934 ATGTGTAAGGGTTTGGTGATAGAGAGAATCGAAGATTCAATATCAGAAGAGGATAAGAGGTTCATTTATCTTGGAGATGGAAGTGGAGACTATTGTCCAAGTTTGAGGTTGAAAGAGAAGGACTTTATGATGCCAAGGAAGAACTTTCCGGTGTGGGATTTGATATGCAGAGATCCTTCACTTGTTAAGGCTGAGATTCATGGCTGGAGTGATGGAGAAGAACTTGAACAAGTTTTGCTGCATTTGATCAACAAAGTATCATTGGACCAAAATTCTACCTTCATTTCCTCTGATTGCAAGCTTCAGACTCTGTCAGTCTCTGTTCATGAGGCTTTGCCCAAAGCTCTACCAGTTCGACCATAG 363 0.4132 MCKGLVIERIEDSISEEDKRFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICRDPSLVKAEIHGWSDGEELEQVLLHLINKVSLDQNSTFISSDCKLQTLSVSVHEALPKALPVRP 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02934 120 Pfam Putative Phosphatase 1 83 IPR016965 GO:0016791
Vimu11g02934 120 Gene3D - 1 98 IPR023214 -
Vimu11g02934 120 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 89 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02934 Vimu-Chr11 49110435 49111355 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02934 K13248 - gmx:100785878 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02934 11 49110435 49111355 Vimu4g00305 4 2263004 2267916 PCT