Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02821 ATGATGATGTCAGACCCCCTTTGGAAGATTCTGCGGAGGATCATTCCGAGGAGAAAAAGGAGTCTGATCCATTCGCGGTTCCCACGGCCGGAGCTTTTTACATGCACGATGACCGATTTGGGGACAATGCTGGTACCCGCAACAGACGGATACATGGTGGAGGAAGGAGACTGTGGGAATCCAAAGATGACAAAAAATGGGGTCATGATAAATTTGAGCAAATTTTGCATGAAAAGCATTATGAGGAGATCTGGGAAATCTCGTGAGAAAAATTCAAATGTTAGTTTGGAGAGGACTTCAACACCTTCTTCCCATGCAGAATCTGACCCTGTGCCTTCTAAAAATCAAGTGCTGGCATCAAATTTGAATTCAGCTTCCCCACCATATTACCCCTCAGGCTCTTCCAGCAATGATATTAATTTGGCACAAAAAAGGGAGGTGCAAACAGGTGGCGGTAGCAGGAATGTTGGTCCTGTTGCTGTGGATGAGGGTTTTCCAGTTCAACAAAAGAATGCTCTGATTCAGGGAAAGAATGTTGTTGGTTCCGTCAGCATGTCAAAGTTGTATATAAATGAATCCACCCCTCAATCTGTTGGAAAGCCTTTGAGCAATGTGCGTATGGCACGATCTGGTTCTTCTGCAGTCAATGCTTCTCAATCTCCTCACCCAAGGGCTTCTGGGAGTGGGAGGGGAGTATCAATCCCAGTACAGACAAATTTTCAGCGTTCTCCCTCACATAATAAAGTTTCTCCATCAGAATTCCAGGCTATTCAGACAAGTTCTACTCCAGGTAGGAATTCAACTTCTGTGCAAGCTACTGCCCCACGGTTGGGCCAAAGACCTGGCAGTGGGTCTCCATTGTCATCACCCTCCAAAACAGCCACGCCAATTAATTCACATGATTCTGGAGAATTGGATTCAGGGTCAGAATCTGGTAAAGGCAAAGGGGCTTTGGTTGGGAAGGGGAGGGGAGGTTCCCATGGCGCAGGACAGGGAGCTTTTGTTTATGGTGGGGCACAAGTAATAGGCACCGCTGGAAATTTGGGTGTTAGCCATGGAGATCCAAACTTCCCTGCTTTCTTGCCAGGTTTGTACCTACATTACTGA 1107 0.467 MMMSDPLWKILRRIIPRRKRSLIHSRFPRPELFTCTMTDLGTMLVPATDGYMVEEGDCGNPKMTKNGVMINLSKFCMKSIMRRSGKSREKNSNVSLERTSTPSSHAESDPVPSKNQVLASNLNSASPPYYPSGSSSNDINLAQKREVQTGGGSRNVGPVAVDEGFPVQQKNALIQGKNVVGSVSMSKLYINESTPQSVGKPLSNVRMARSGSSAVNASQSPHPRASGSGRGVSIPVQTNFQRSPSHNKVSPSEFQAIQTSSTPGRNSTSVQATAPRLGQRPGSGSPLSSPSKTATPINSHDSGELDSGSESGKGKGALVGKGRGGSHGAGQGAFVYGGAQVIGTAGNLGVSHGDPNFPAFLPGLYLHY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02821 368 MobiDBLite consensus disorder prediction 194 326 - -
Vimu11g02821 368 MobiDBLite consensus disorder prediction 82 138 - -
Vimu11g02821 368 PANTHER PROTEIN MLN51 HOMOLOG 82 362 IPR044796 GO:0003729|GO:0006397|GO:0035145
Vimu11g02821 368 MobiDBLite consensus disorder prediction 94 138 - -
Vimu11g02821 368 MobiDBLite consensus disorder prediction 194 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02821 Vimu-Chr11 48298106 48303857 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02821 - - gmx:100796971 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02821 11 48298106 48303857 Vimu11g02821 11 48298106 48303857 ECH
Vimu4g00208 4 1446287 1449522 Vimu11g02821 11 48298106 48303857 PCT