Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02789 ATGAAGTACAACGGTGTTGAAAACCCTCTTCGCCTTCAGTCTGTGAATCATATCTCCCTCATATGCAGATCAGTGGAAGAATCCATGGATTTCTACCAGAACGTTCTCGGATTTTCCCCAATCAGGAGGCCTGGTTCTTTTGATTTTGATGGGGCATGGCTATTCGGCTATGGTATCGGAATTCATCTGCTAGAAGCAGAGAACCCAGAAAAGTTGCCAAAGAAGAAGGAAATTAACCCAAAGGATAATCATATATCTTTTCAGTGTGAGAGCATGGGAGCTGTGGAGAAGAAGCTGAAGGAGATGGAAATTGCTTATGTGAGAGCAACAGTGGAGGAAGGAGGTATTCAAGTGGACCAGCTATTTTTCCACGACCCTGATGGATTCATGATCGAAATATGCAACTGTGATAGTCTTCCTGTGATTCCCTTGGTTGGTGAAGTGGCAAGATCATGTTCCCTTGTGAATCTTGAGAAAATGCAGAATCAGCAGCAGATACAAAACATGCTTCAGAAACTCTGA 522 0.433 MKYNGVENPLRLQSVNHISLICRSVEESMDFYQNVLGFSPIRRPGSFDFDGAWLFGYGIGIHLLEAENPEKLPKKKEINPKDNHISFQCESMGAVEKKLKEMEIAYVRATVEEGGIQVDQLFFHDPDGFMIEICNCDSLPVIPLVGEVARSCSLVNLEKMQNQQQIQNMLQKL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02789 173 Gene3D - 2 173 IPR029068 -
Vimu11g02789 173 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 136 IPR037523 -
Vimu11g02789 173 CDD VOC_like 15 133 - -
Vimu11g02789 173 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Vimu11g02789 173 PANTHER - 8 168 - -
Vimu11g02789 173 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 135 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02789 Vimu-Chr11 48070160 48071405 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02789 - - pvu:PHAVU_010G154400g 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02789 11 48070160 48071405 Vimu11g02789 11 48070160 48071405 ECH
Vimu4g00171 4 1119858 1120836 Vimu11g02789 11 48070160 48071405 PCT