Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02750 ATGGTTCGTCTCGTTTCAATTCTTGTTCTTTCATGGATCTTGTTTTCTCCATGCCATGCAGAAGATTCAGGGTCCCCAAAAGAAACCCAGAATGGAAACCCTGCACCTGAGAATAACTCAATAATACCATTAGCAGCAACAAGAACATACAGAATTGACCCAAGTAATGATTTCAATTACTACGATGGTGGATGGGATATTACCAATACACATTATTATATGTCTCTTGCTTTTTCTGGTGTTCCTCCGGTTGCTGTTGCTGTCTTATGGTTTTTCATGGTGGCAATTGTCTTCACCCTCATAGCTTTATTGAGTTGTTTTGGCTGCTGTAAGGGAAAGCACAGTGCTGAAATTGGAGGGTTTTTCCTTTACACTGGACTGGAGAGATTCCAGATTACTGCAAATGATGTATCAGATGTTCTTGTCACGAAAGCAAACTCAATATTTGATATTGTTCAAAACGTGGTAACCAATCTTGCAGCGGCCAAGAACATACAAGTAGCTGGTTGTACTCTTCCAGATGATATCAAGCAAGGCATTGAAATGGCTGAAAATTTCACCAACGAAGCTGATATTATTAGGAATCAAGCAGAGAAAACTGCAAGAATCTCAATGGAATTCCTGAATGCTATAAGCGAAAGTCTGATCATTGTTGGCTCTATGATGCTTATTTTGGCAGCGATCGGCTTCATCGTCTCTTTTCTTGGCTGGAAAGTAGTCGTTTATATCTTGGTTTTCTTTGGGTGGATTCTGGTCACAATCACATTTCTGTTGAGCAGCTTATCTTTGGTTGTTCATAATGGTGTAGCTGACACATGTGTTGCCATTGATGAATGGGTTCAACACCCACGAAGTGAATCAGCTCTAAGCAAGCTTCTTCCTTGCATGGATGAGGCAACAACCCAGAAAACCTTGGACATAAGCAAAAACACCTCGTACCTTGTGGCATATCAGAGTTTTTTATGTGATACATCTCCATCTGGTGTGTGCATTACAGTGGGGAGATTGACTCCATCCCTGTACTCAAAGGTTATGGTGGCTACCAACTTGAGTGACTCACTGTATCGAAATGGTCCAGTCTTTGCTGGACTATTAAACTGTTCTTTTGTCATAGGAACATTTGATCAAATCAATAACGATGATTGCCCTTCGTTCAAGCGAAACAGCCACCAGATATTCATTGGCTTGGTGGTTGTTTCAACTGCAGTAATGTTTTCTGTGATTTTGTGGGTTGTCTTTGTCAAAGAAAGACAAGTTCAAATGTCTGCAAAGATGAGGACAAGAACAACAACACCAACACCTTTTGTAGTTCCACAAGAACATGACCATGATGTAGTTCCACAAGACCAAGAAAACCATATTAGCACACCATAA 1374 0.4054 MVRLVSILVLSWILFSPCHAEDSGSPKETQNGNPAPENNSIIPLAATRTYRIDPSNDFNYYDGGWDITNTHYYMSLAFSGVPPVAVAVLWFFMVAIVFTLIALLSCFGCCKGKHSAEIGGFFLYTGLERFQITANDVSDVLVTKANSIFDIVQNVVTNLAAAKNIQVAGCTLPDDIKQGIEMAENFTNEADIIRNQAEKTARISMEFLNAISESLIIVGSMMLILAAIGFIVSFLGWKVVVYILVFFGWILVTITFLLSSLSLVVHNGVADTCVAIDEWVQHPRSESALSKLLPCMDEATTQKTLDISKNTSYLVAYQSFLCDTSPSGVCITVGRLTPSLYSKVMVATNLSDSLYRNGPVFAGLLNCSFVIGTFDQINNDDCPSFKRNSHQIFIGLVVVSTAVMFSVILWVVFVKERQVQMSAKMRTRTTTPTPFVVPQEHDHDVVPQDQENHISTP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02750 457 MobiDBLite consensus disorder prediction 430 457 - -
Vimu11g02750 457 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 35 311 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02750 Vimu-Chr11 47796318 47800826 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02750 - - vum:124835866 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01125 7 10957244 10960393 Vimu11g02750 11 47796318 47800826 ECH
Vimu10g00696 10 5990222 5994470 Vimu11g02750 11 47796318 47800826 ECH
Vimu11g02750 11 47796318 47800826 Vimu11g02750 11 47796318 47800826 ECH