Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02554 ATCTCACCAACATTTGAAGATCCTCCTCATACCAAATTCACAACACTTCAAATGCAAGATAGTGCTTACAAAATGGAGAACAAAAGGAAGACTTTACTGTTGCTGCTGCTGCTCATGGCAGCACCATTCTTCTACATGCCAAATGTGACGGATGCTGCTTCTGATGTTAACTTTGAAGGCCATCTCACCCATTCTGAGCTCGTGAAAGGACCCATCAGAAAGTTTTTGTCATTTGTGGATTGTGGAGATAGGTGCAGAGTGAGATGCAGTTTGCATTCGAGGCCAAAGATCTGCGCAAGAGCTTGTGGGACATGCTGTTCAAGGTGCAACTGTGTTCCTCCAGGCACTTATGGAAACAGAGAGGTGTGTGGGAAGTGTTACACAGACATGATGACTCATGGAAACAAACCTAAGTGTCCCTAG 423 0.4492 ISPTFEDPPHTKFTTLQMQDSAYKMENKRKTLLLLLLLMAAPFFYMPNVTDAASDVNFEGHLTHSELVKGPIRKFLSFVDCGDRCRVRCSLHSRPKICARACGTCCSRCNCVPPGTYGNREVCGKCYTDMMTHGNKPKCP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02554 140 Pfam Gibberellin regulated protein 80 140 IPR003854 -
Vimu11g02554 140 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 29 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02554 Vimu-Chr11 45182752 45183665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g02554 - - vun:114179735 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02554 11 45182752 45183665 Vimu10g01166 10 11315119 11315966 ECH
Vimu11g02554 11 45182752 45183665 Vimu11g02554 11 45182752 45183665 ECH