Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01166 ATGGCGTCACGCGCATTTCTTATGTTGGGGATGCTTCTGCTGGTGTGTCTTGTTAAGGTTTCATCTGATCTGAAGATAGAAGAAGAAACACTAGAAGAAGAACTGCAGTTTCCCAATGAACCACTTGTCATGAGAGACGGGAACAGAAGGCTAATGCAAGAAATAGATTGTGGTGGGTTATGCAAGTCAAGATGCAGTGCTCATTCAAGGCCGAACGTGTGTACTAGGGCATGTGGCACGTGCTGTGTGAGATGCAAGTGTGTCCCACCTGGTACCTCTGGAAATAGGGAACTCTGTGGAACTTGCTACACTAGCATGACCACCCATGGCAACAAGACTAAGTGCCCTTAG 351 0.4729 MASRAFLMLGMLLLVCLVKVSSDLKIEEETLEEELQFPNEPLVMRDGNRRLMQEIDCGGLCKSRCSAHSRPNVCTRACGTCCVRCKCVPPGTSGNRELCGTCYTSMTTHGNKTKCP 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01166 116 Pfam Gibberellin regulated protein 56 116 IPR003854 -
Vimu10g01166 116 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 4 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01166 Vimu-Chr10 11315119 11315966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01166 - - gmx:100305516 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02554 11 45182752 45183665 Vimu10g01166 10 11315119 11315966 ECH
Vimu10g01166 10 11315119 11315966 Vimu10g01166 10 11315119 11315966 ECH
Vimu7g00709 7 7083424 7084046 Vimu10g01166 10 11315119 11315966 PCT