Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01867 ATGTTGTTTGTGCAGAGGGATGTGGAGAACAAGGGTCACGAAGGACTGAAACATCTTGGGTTTGTTAAGATTGCAGCCATTAAAGGCTTTGTGTGTGTTTCGAATCTCTACCACTTCGCGAAGCAAAATTCTGGACCCTTGAGATATGCAGTTGGAACCGTCGAAGATACAGTAACTACTGTTCTGGGTCCTGTCTACCACAAATGGAAGGGTGTCCCAAACCGTCTTCTCCTTTTTGTGGACAATAAGGTGGATGAAGCAACCCATAAATTCGATGAGCATGCACCTTCTCTGGTTAAGCAAGTTGCAAGCCAAGCGAATTGTTTGGTCCAGGAAATGACAAACAAGGCTGAAAAAGTAGTGAGTGAGGCTCAATCTGGTGGGGCACGAGCAGCAGCACAATATATTGCCACAGAGTCAAAGAAAATTGTGGTATTTGGTTCGGTGAAATTATGGGGTGGTCTCAACCACTATCCACCATTCCATGCAGTGGCAGAAATGGCGGTTCCCACTGCTGCACATTGGTCAGAAAAGTACAACAATGTGGTGAAGGGAATGAGTAAAAAGGGTGGTGGTGTGTTAGGGTATTTGCCTCTGATTCCAACTGATGACATAGCCAAGGCGTTTAAGCAGGGGGGAGGCAATGTGAATGAAGATGAAGCAGGTTCTGAAGGAGAGGATTCTTCTTGA 690 0.458 MLFVQRDVENKGHEGLKHLGFVKIAAIKGFVCVSNLYHFAKQNSGPLRYAVGTVEDTVTTVLGPVYHKWKGVPNRLLLFVDNKVDEATHKFDEHAPSLVKQVASQANCLVQEMTNKAEKVVSEAQSGGARAAAQYIATESKKIVVFGSVKLWGGLNHYPPFHAVAEMAVPTAAHWSEKYNNVVKGMSKKGGGVLGYLPLIPTDDIAKAFKQGGGNVNEDEAGSEGEDSS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01867 229 MobiDBLite consensus disorder prediction 210 229 - -
Vimu11g01867 229 Pfam Rubber elongation factor protein (REF) 13 211 IPR008802 -
Vimu11g01867 229 PANTHER REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940 12 217 IPR008802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01867 Vimu-Chr11 26641972 26643232 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01867 - - gmx:100500275 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01867 11 26641972 26643232 Vimu11g01867 11 26641972 26643232 ECH
Vimu6g01510 6 14284178 14291596 Vimu11g01867 11 26641972 26643232 PCT