Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00747 ATGTCAGAGATAGTGAAGCAACTGTTGGCGAAGCCGATCCAATTGGCGGACCAAGTCACCAAGGCAGCGGAAGAGGCCAGTTCCTCGTTCAAGCAAGAGTGCTTAGAACTCAAATCCAAGACCGAAAAACTCGCGGGGCTTCTTCGACAAGCAGCGCGTGCGAGCTCCGACCTGTACGAGCGTCCGACTCGGCGCATAATCGCCGACACTGAACTCGTCCTCGACAAGGCCTTGGCTTTGGTGCTGAAATGCCGCGCCAACGGCCTCATGAAGCGCGTGTTCAGCATCATTCCGACGGCGGCGTTTCGGAAGATGTCGTCCCAACTCGAGAATTCCATCGGCGACGTGTCCTGGCTTCTCCGGGTGTCGGCTCCGGCGGAGGATCGCGGTGACGAGTATCTCGGTCTCCCTCCTATAGCTGCCAACGAGCCCATTTTGGGCCTCATTTGGGAGCAGGTGGCGACCCTCCACACGGGCTCTCTCGACGACCGATCTGATGCAGCCGCCTCGCTGGTGTCGCTCGCACGTGACAACGACCGCTACGGGAAGTTGATAATCGAGGAGGGTGGGGTTGGACCCTTGTTGAAGCTGATGAAGGAGGGTAAGAAAGAGGGTCAAGAGAACGCCGCCAGGGCTATTGGGCTTCTTGGCCGTGACCCTGAGAGCGTGGAGATTATGATCCATGCGGGGGTGTGCTCTGTCTTCGCCAAAGTCCTCAAAGAAGGTCCCATGAAAGTTCAAGCTGTGGTTGCCTGGGCCGTGTCTGAGTTGGCCGCCAAGTACCCTAAATGTCAAGATCTTTTCGCTCAGCATAATATCGTTCGCTTGCTTGTAAGTCATCTTGCTTTCGAAACCGTTCAGGAGCACAGTAAATACGCAATTGTTAGCTACAAACCCACCTCAATCCATGCTGTTGTTATGGCTAGTAATAACTCTAATGGTAATAGTTTGAAAAAGGAGAGTGAAGATGAGGAAAAGCTGATGCAGAGTCGCATGCAGCATCCTTTGGGTGATAAGTCCACAAATCAGATGCACAAAGTGGTCACAAGTACCATGGCATTGCATGCTGCCAACAAGCAGCAGCAACAGTCCAATGATGACAATGGAGTCGCTCAGAACCCACAGGGTGCTCAGCCAAAGGCCAATGGGAATAGCAATGGCAAGCAAAGCCATCAGTCCCACCAGCAAAGTTATACCTACTCTGGGATTAACATGAAGGGAAGGGAACTGGAGGACCCAGAGAACAAGGCTTACATGAAAGCAATGGCAGCAAGAGCCCTCCGGCAGCTCGCCAAGGGCAACGTAGCCATTTGTCGGAGCATCACTGAATCGAGGGCTCTGTTGTGCTTTGCAATTCTCCTTGAGAAAGGGTCTGAAGATGTGAAGTACAATTGTGCCTTGGCAGTGAAGGAGATCACGGCAGTGGCAGAAAAAGATGCAGAATTGAGAAGATCAGCTTTCAAACCCAACTCTCCTGCTTGTAAGGCGGCGGTTGATCAAGTGCTCAAGATCATTGAGAAGGAAGATACAAAACTCCTTATTCCTTGCATAAAGGCTATAGGGAATTTGGCAAGGACATTCCGGGCAACAGAGACAAGGATAATCGGTCCCTTGGTCCGGCTTCTTGATGAAAGAGAAGCAGAAGTGTCAAGGGAAGCGGCAATCTCTCTCACAAAATTTGCCTGCTCGGAAAACTACCTCCACCTTGATCACTCCAAGGCAATTATAAGCGCAGGTGGTGCAAAGCACTTGGTTCAGCTTGTGTATCTTGGAGAACAGACAGTTCAGATTTCAGCACTGGTTCTACTCTCCTACATTGCATTGCATGTGCCAGACAGTGAGGAACTTGCTCGGGCTGAGGTTCTTGGAGTTCTGGAATGGGCTTCGAAGCAACCTAGCGTGACGCAGGATGAAACCATCGAGGCTTTGTTGCAGGAATCCAAAGGCAGGCTTGAGCTTTATCATCTTCTGACTCTTCCTACACAATTATCTTCGAACGTCCGGTCACACAAACTCTCCTCTTCTACTCGGTTCCTCTTGTCAGGCACCTGCACTCCGATGCTCAAGCTTCTAACGTCGCCATTTTCTTACCGACCATTCTTTCTCAGTCCGTCCGGTTCATATGGTTCTCCGATACCCTCCGTGCATCAATCTATACCGAACGCTAATCTTCAAAACCCAACATTTTTTAATGCTGAAAGCGGAGTCGGAACTAATTCATACTCACACAGTTTGGCCACTCATATTCCAACCCCTTCCAACTCTCACAAGATCTGTTTCTTCTCATTCCCTAACTATTACACCGTTCTTCTCCATATTCGTTTGGTTCTTCTTCATATTCCTGTCTCCATATCCGTTTGGTTTTGTGGTGCGGTGGTGCGAGATGTTTGTGGTCATTCGACGGTGTAG 2409 0.5048 MSEIVKQLLAKPIQLADQVTKAAEEASSSFKQECLELKSKTEKLAGLLRQAARASSDLYERPTRRIIADTELVLDKALALVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDVSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVATLHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLMKEGKKEGQENAARAIGLLGRDPESVEIMIHAGVCSVFAKVLKEGPMKVQAVVAWAVSELAAKYPKCQDLFAQHNIVRLLVSHLAFETVQEHSKYAIVSYKPTSIHAVVMASNNSNGNSLKKESEDEEKLMQSRMQHPLGDKSTNQMHKVVTSTMALHAANKQQQQSNDDNGVAQNPQGAQPKANGNSNGKQSHQSHQQSYTYSGINMKGRELEDPENKAYMKAMAARALRQLAKGNVAICRSITESRALLCFAILLEKGSEDVKYNCALAVKEITAVAEKDAELRRSAFKPNSPACKAAVDQVLKIIEKEDTKLLIPCIKAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKFACSENYLHLDHSKAIISAGGAKHLVQLVYLGEQTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKQPSVTQDETIEALLQESKGRLELYHLLTLPTQLSSNVRSHKLSSSTRFLLSGTCTPMLKLLTSPFSYRPFFLSPSGSYGSPIPSVHQSIPNANLQNPTFFNAESGVGTNSYSHSLATHIPTPSNSHKICFFSFPNYYTVLLHIRLVLLHIPVSISVWFCGAVVRDVCGHSTV 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00747 802 PANTHER ARMADILLO REPEAT ONLY 4 1 655 - -
Vimu11g00747 802 Gene3D - 3 122 IPR036537 GO:0007166
Vimu11g00747 802 Gene3D - 405 694 IPR011989 -
Vimu11g00747 802 MobiDBLite consensus disorder prediction 311 342 - -
Vimu11g00747 802 MobiDBLite consensus disorder prediction 317 332 - -
Vimu11g00747 802 SMART arm_5 177 218 IPR000225 GO:0005515
Vimu11g00747 802 SMART arm_5 434 474 IPR000225 GO:0005515
Vimu11g00747 802 SMART arm_5 490 525 IPR000225 GO:0005515
Vimu11g00747 802 SMART arm_5 219 259 IPR000225 GO:0005515
Vimu11g00747 802 SMART arm_5 568 608 IPR000225 GO:0005515
Vimu11g00747 802 SUPERFAMILY ARM repeat 155 635 IPR016024 -
Vimu11g00747 802 FunFam Armadillo repeat only 4 2 122 - -
Vimu11g00747 802 Gene3D - 149 329 IPR011989 -
Vimu11g00747 802 FunFam Armadillo repeat only 2 151 321 - -
Vimu11g00747 802 MobiDBLite consensus disorder prediction 357 396 - -
Vimu11g00747 802 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00747 Vimu-Chr11 7905422 7909927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00747 - - gmx:100794693 1126.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00747 11 7905422 7909927 Vimu11g00747 11 7905422 7909927 ECH
Vimu7g03057 7 25809454 25812633 Vimu11g00747 11 7905422 7909927 PCT