Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00638 ATGGAATCATCTTGGACCCAAAGGCAAAACAAAGAATTTGAAAAAGCCCTTGCTAAATATGATATAGAAACCCCAGATAGGTGGCAGAATATTGCCAACGAGGTGGGAAAATCAGTGGACGAGGTTAAAAGGCAATTTGAGATCCTCAAAGAAGATGTCCGACGCATTGAGCGTGGTCAAGTCATTGATTCAGGGCGCCCAACAAAATTGAAGACCGGTGACGATGTTAAACGTATACGCAGGTGTAGAAGAAAAAGAATATATAGTGATCCAGTAAATGAGATGGGGTGGTACTGTGGTGGGAAAAAGTGGAGCACAGTATCTGAAGAAAGAAAGGAATGTAGGTCAATGGTCTCAGAAGGCAACAAACGAAGCAAAGAGTTGAAAATTGAAATGATAGGGTAG 405 0.4173 MESSWTQRQNKEFEKALAKYDIETPDRWQNIANEVGKSVDEVKRQFEILKEDVRRIERGQVIDSGRPTKLKTGDDVKRIRRCRRKRIYSDPVNEMGWYCGGKKWSTVSEERKECRSMVSEGNKRSKELKIEMIG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00638 134 FunFam Transcription factor SRM1 1 62 - -
Vimu11g00638 134 CDD SANT 4 50 IPR001005 -
Vimu11g00638 134 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 64 IPR044636 GO:0003700
Vimu11g00638 134 Gene3D - 1 62 - -
Vimu11g00638 134 Coils Coil 39 59 - -
Vimu11g00638 134 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Vimu11g00638 134 SMART sant 1 52 IPR001005 -
Vimu11g00638 134 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00638 Vimu-Chr11 6865100 6866918 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00638 - - pvu:PHAVU_003G254400g 101.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02960 7 24949368 24958972 Vimu11g00638 11 6865100 6866918 PCT