Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00463 ATGCAGAATCAAAGCCAAGTGACAATGGTAGTTCTTTTGGCACTCTCCCTCGTTAATGGCTTCTCCTGCCTCAAGCTAGGAGAAACTTGTGGGTCTCAGAACAAATGTGACGGTGGTCTTAATTGTGGAACATGTCCTGAAAATGGGAACACCCGCTCTAGATGCGTAAGGACCCAACCTATAATCCCTACTTCCAAGAATGGAGTCCGTGGCTTTATGTTAGATATGTATGAATTTAACGATGACATATGGTTGTGTCACTCCTTCGGAGGCAAGTGTTACGAAGCGACGTCGTTTGTAAGTGCAGGAGTTACCTTACATATATATGTTTTTGTGAAATGTAGAATCTCTAATTTGTCTGCGTATAACCATGCATGCCAGAAACGTGCTATAAACGTGCTTAAAGAAGTTGAAGCATTTCTGGGAGCAAATCCATCAGAAATTGTGACCATCTTCATTGAAGACTACGTGTCATCACCGACGGGGATTTCAAAGGTGTTTAACGATGCTGGGTTGACCAAGTACTTGTTTCCATTGTCGAGAATGCCCAAAAACGGTGAAGAATGGCCAACCGTCGATGACATGGTTCAGAAGAATCAACGCTTGCTTCTTTTTACCTCTAAATCATCTAAAGAAGCTTCTGAAGGCATTGCTTATCAGTGGACATACGTTGTAGAAAACCAATATGGAGATGACGGAATGGTAAATGGTTCTTGTCCAAATCGTGGAGAATCTCCAGCTATGAACACCAAATCAAGGACATTGGTTTTGATGAACTATTTTCTGAGTAATGCTAATGCAACTTCGACTTGTGCTCATAATTCGGCTCCATTAGTTGATATGCTGAAAACTTGTCATGCTGCTGCTGATAATCGGTGGCCGAATTTCATTGCCGTTGATTTTTATATGAGGAGTGACGGAGGAGGAGCCCCTGAAGCTGTTGACATAGCCAATGGCCACTTAACCTGCGGATGTGACAACATTGCCTATTGCAAGGAAAATGCCGCATATGGAACATGTGATGTGCCTCCAATTTCTCCACCGCCACCGGCGGCTGCTCCCCCGGTCGCCGTTGTAAAAAAAGCAGAGCCACCGACGGAGGAAGAATTTCATGTGGACACCCCTCTCAAGTTGCTGAAATTTTTATGGGTAATACTTCATGTGGACCACTTTCTTGATTTGGCTAAAACTTTAACAAACCACATTACTAACACTGCTTAA 1221 0.4333 MQNQSQVTMVVLLALSLVNGFSCLKLGETCGSQNKCDGGLNCGTCPENGNTRSRCVRTQPIIPTSKNGVRGFMLDMYEFNDDIWLCHSFGGKCYEATSFVSAGVTLHIYVFVKCRISNLSAYNHACQKRAINVLKEVEAFLGANPSEIVTIFIEDYVSSPTGISKVFNDAGLTKYLFPLSRMPKNGEEWPTVDDMVQKNQRLLLFTSKSSKEASEGIAYQWTYVVENQYGDDGMVNGSCPNRGESPAMNTKSRTLVLMNYFLSNANATSTCAHNSAPLVDMLKTCHAAADNRWPNFIAVDFYMRSDGGGAPEAVDIANGHLTCGCDNIAYCKENAAYGTCDVPPISPPPPAAAPPVAVVKKAEPPTEEEFHVDTPLKLLKFLWVILHVDHFLDLAKTLTNHITNTA 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00463 406 PANTHER UNCHARACTERIZED 64 332 - -
Vimu11g00463 406 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 308 IPR017946 GO:0006629|GO:0008081
Vimu11g00463 406 SUPERFAMILY PLC-like phosphodiesterases 60 319 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00463 Vimu-Chr11 4962267 4965814 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00463 - - gmx:100809640 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu5g02312 5 34045251 34047378 Vimu11g00463 11 4962267 4965814 ECH
Vimu11g00463 11 4962267 4965814 Vimu11g00463 11 4962267 4965814 ECH