Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03687 ATGGCCATCAGAAAATCAAACAAGACTTCTCAAACCACAGTCCTCAAGCAAATCCTCAAAAGATGTTCCAGCATGGGAAAGAAGAACAACGACTACGACCATAACGATGATGCTCTTCCTCTCGATGTCCCCAAAGGCCATTTCGCTGTCTACGTCGGAGAAAACAGAAGTAGATACATTGTTCCCATCTCCTTTTTGACTCATCCTCAGTTTCAGTCCCTCCTTCGACAAGCTGAGGAAGAGTTTGGCTTCGATCACGATATGGGACTCACTATTCCCTGCCAAGAAGTTGTTTTCCGCTCTCTAACATCCACTCTACGATGA 324 0.4537 MAIRKSNKTSQTTVLKQILKRCSSMGKKNNDYDHNDDALPLDVPKGHFAVYVGENRSRYIVPISFLTHPQFQSLLRQAEEEFGFDHDMGLTIPCQEVVFRSLTSTLR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03687 107 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 41 106 IPR003676 GO:0009733
Vimu10g03687 107 Pfam Auxin responsive protein 21 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03687 Vimu-Chr10 45921939 45922262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03687 40 102 Calmodulin-binding Proteins AT3G43120 55.556 2.65e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03687 K14488 - rvl:131308017 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03687 10 45921939 45922262 Vimu10g03687 10 45921939 45922262 ECH
Vimu10g03687 10 45921939 45922262 Vimu11g00724 11 7720754 7721071 ECH