Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03475 ATACGAGCACGTTCCCTTTTCCCTTTTCACAGCAACCTCTTTGAACTTTTCTCTTCAACCTTATTCTGTCCCTATAGCTGTTTTTCAGTCCAAACCCACAACACAATGGCTTTGAGAAAATCAAGTAAACTCCCTCAAGCAGCACTGATCAAGCAAATCCTCAAGAGGTGTTCCAGCTTAGGGAGGAAAGACGATGAAGGTCTGCGCTTGGACGTCCCCAAGGGTCACTTTGTTGTCTACGTCGGAGAAAACAGAAGCAGATATATAATCCCAATCTCCTTCCTAAGTCGCCCTGAGTTTCAAACACTTCTACACCAGGCTGAAGAAGAGTTTGGCTTCGATCACGAAAAGGGTCTCACCATTCCATGCCAACAAGACGTTTTTGAGTCTCTCACCTCCATGCTCCGATGA 411 0.4574 IRARSLFPFHSNLFELFSSTLFCPYSCFSVQTHNTMALRKSSKLPQAALIKQILKRCSSLGRKDDEGLRLDVPKGHFVVYVGENRSRYIIPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCQQDVFESLTSMLR 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03475 136 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 58 134 IPR003676 GO:0009733
Vimu10g03475 136 Pfam Auxin responsive protein 62 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03475 Vimu-Chr10 44483466 44484335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03475 71 131 Calmodulin-binding Proteins AT3G43120 55.738 1.32e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03475 K14488 - gmx:100305700 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03475 10 44483466 44484335 Vimu11g00724 11 7720754 7721071 ECH
Vimu10g03475 10 44483466 44484335 Vimu10g03475 10 44483466 44484335 ECH