Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu10g03259 | ATGTCCGAACCGGAAAACGCGCCCGAACCCCAATCGGAGCAAGACTCCGTCCCGCCGTCGAAGCTGCCTACCCAAGACCAACCCGCCGCTGCCGCCGCCAAGCTCGGCTCCCCTAGCGTCACCTTCACCATTTGGCCTCCCACTCAGCGTACGCGCGATGCCGTCATGAACCGCCTGACCGAAACCCTGTCCTCCCCATCCGTCCTCTCCAAGCGCTACGGGACAATGCCTCCCGAGGAGGCCTCTGCTGCCGCGCGCCAGATCGAGGGTGAGGCCTTCGCCGTCGCTGGCGGCTCCTCCACCTCTGATAGCGATGGGATCGAGATCCTCCAGGTTTACTCCAAGGAGATCAGCAAACGGATGCTCGACACCGTCAAGTCCAAAGCCAACACCGGCTCTACCGCCGTCGATAACGGTGTTGCTGAGAACCCTACCTCCGAAGTTGCTCCTACCCCTGCCGCAGAGAGCGATCCTGCCGCTGCTGCCGAGTCCGAAACCTGA | 501 | 0.6327 | MSEPENAPEPQSEQDSVPPSKLPTQDQPAAAAAKLGSPSVTFTIWPPTQRTRDAVMNRLTETLSSPSVLSKRYGTMPPEEASAAARQIEGEAFAVAGGSSTSDSDGIEILQVYSKEISKRMLDTVKSKANTGSTAVDNGVAENPTSEVAPTPAAESDPAAAAESET | 166 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu10g03259 | 166 | Gene3D | WPP domain | 41 | 136 | IPR038214 | - | |
| Vimu10g03259 | 166 | PANTHER | WPP DOMAIN-CONTAINING PROTEIN 1-RELATED | 1 | 160 | IPR044692 | GO:0000278|GO:0048527 | |
| Vimu10g03259 | 166 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
| Vimu10g03259 | 166 | MobiDBLite | consensus disorder prediction | 128 | 166 | - | - | |
| Vimu10g03259 | 166 | MobiDBLite | consensus disorder prediction | 128 | 145 | - | - | |
| Vimu10g03259 | 166 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Vimu10g03259 | 166 | Pfam | WPP domain | 42 | 132 | IPR025265 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vimu10g03259 | Vimu-Chr10 | 42874368 | 42878037 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu10g03259 | - | - | vun:114162267 | 248.44 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vimu10g03259 | 10 | 42874368 | 42878037 | Vimu10g03259 | 10 | 42874368 | 42878037 | ECH | |
| Vimu1g02952 | 1 | 41857819 | 41860741 | Vimu10g03259 | 10 | 42874368 | 42878037 | PCT |