Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03158 ATGAATGAAGACGAAGACGAAGAAGAAGAAGAACACCAACATCCTTTCCCTTCGTTACTCTCAAAAAACCATACACACAAAGCAAAGCCCAAAGCCCAAATCAAAACAAAACTAACCGTTATGGCTTCAGAAGCACTGCTTCAGCTAGGTCTAACCCTAGAGGAATTCACCGAACTTGAGACCACCATCAACACGCACCACAAGTTCGCGCCATCCCCCAAAATCTGCACCTCCATCATAGCGCAGCGTATCCAGGCTCCCGCGCACACCGTCTGGCCCCTCGTTCGAAGCTTCGACAACCCGCAGAAGTACAAGCACTTCATCAAGAGCTGCAACATGCGCTCCGGCGACGGCGGCGTCGGTAGCATCCGTGAGGTCACCGTCGTGTCCGGCCTCCCTGCCTCCACCAGCACCGAGCGCCTCGAGATTCTCGACGACGTCAACCACCTTCTCAGCTTCCGCGTGGTCGGCGGCGAACACAGGCTCCATAACTACCGCTCCGTGACGTCGGTGAACGAGTTCAACAAGGACGGTAAGGTTTACACCGTTGTGTTGGAATCCTACGTTGTGGACATTCCCGAAGGGAACACCGGAGTGGATACCAAGATGTTTGTGGACACCGTCGTTAAGCTTAACCTTCAGAAACTTGGGGAGGTTGCCATGGCTACCATTCTGCACTGA 681 0.5374 MNEDEDEEEEEHQHPFPSLLSKNHTHKAKPKAQIKTKLTVMASEALLQLGLTLEEFTELETTINTHHKFAPSPKICTSIIAQRIQAPAHTVWPLVRSFDNPQKYKHFIKSCNMRSGDGGVGSIREVTVVSGLPASTSTERLEILDDVNHLLSFRVVGGEHRLHNYRSVTSVNEFNKDGKVYTVVLESYVVDIPEGNTGVDTKMFVDTVVKLNLQKLGEVAMATILH 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03158 226 MobiDBLite consensus disorder prediction 1 32 - -
Vimu10g03158 226 Gene3D - 36 225 IPR023393 -
Vimu10g03158 226 SUPERFAMILY Bet v1-like 76 221 - -
Vimu10g03158 226 Pfam Polyketide cyclase / dehydrase and lipid transport 82 218 IPR019587 -
Vimu10g03158 226 FunFam Abscisic acid receptor PYR1 39 226 - -
Vimu10g03158 226 PANTHER - 76 218 - -
Vimu10g03158 226 CDD PYR_PYL_RCAR_like 76 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03158 Vimu-Chr10 42177766 42179031 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03158 K14496 - gmx:100794619 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03158 10 42177766 42179031 Vimu10g03158 10 42177766 42179031 ECH
Vimu1g02844 1 40740864 40741902 Vimu10g03158 10 42177766 42179031 PCT