Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02915 ATGGAGTCTTGCAAGGGACCAGAGGGAGAGGAAGTGAAGTGCGTGTGGGTTCATGGTCCTATAATCGTAGGGGCAGGACCCTCGGGGCTGGCCGTTGCAGCATGCCTCTCCCACCACGGACTACCCTACGTCATTCTCGAGAGGAGTCACTGCATAAACTCCCTTTGGCAACATAGAACCTACGACCGTCTTAAACTCCACCTCCCCAAACACTTCTGCCAACTCCCCTTCATGCCCTTCCCTCACCATTTCCCCAAATACCCCTCCAAGAATCAGTTCATCTCCTACCTCCATTCCTACGCTCAGCGCTTCAACATCCGCCCCAGGTTCAACCAGTCCGTTCACACCGCTCACTTCGACCCCGTTTCCCAGTTCTGGGTCGTCAGAACCAACGATTTTCAGTACATTTCCCCGTGGCTCGTCGTTGCTACCGGAGAGAATGCCGACCCTGTCATTCCCTCGATTCTTGGCATGGACTCCTTTCACGGACCCATTGTTCACACCAGCGCCTATAAATCTGGTTCTCATTACAAAAACAAGAGGGTTTTGGTAATTGGTTGCGGCAACTCAGGAATGGAAGTAAGCTTGGATCTTTGCAGGCACAACGCCACCCCTTACATGGTCGCCAGAAACACAGTACATGTGCTGCCTAGGGAGATGTTTGGCTTTTCTACGTTTGGAATGGCGATGGGTCTATTGAAATGGCTTCCGATAAAGTTGGTAGACAAGGTGGTATTGGCGTTGGCTGGGTTAATGTTAGGTGACACCGCCCGCTACGGCGTCAGGAGGCCAAAAACTGGGCCAATAGAGCTGAAACTTGTCAGCGGTAAAACCCCTGTGCTAGATGTTGGACAAGTAGCGCAGATAAGATCCGGTAACATCAAGGTGATGGAAGGTGTGAAGGAGATAACAAGAAACGGTGCCAAGTTTATGGACGGACAAGAAAAGGAGTTCAGTGCTATAATATTAGCAACAGGTTACAAAAGCAACGTGCCCACTTGGCTTAAGAGCCGTGAATCTTTCACCAAAGACGGAATGCCCAAAACGCCGTTTCCAATGGGTTGGAAGGGAGAGAATGGATTGTATACGGTTGGGTTCACGGGAAGAGGTCTTCTTGGAAGTGCATCGGACGCCGTAAAGATTGCCGAAGACATAGCTGATCAATGGATGAGCGTTAAGGACAAATCATGCCTTAATTCCCACATGATCTTGCTCAAGAGTACATAG 1227 0.502 MESCKGPEGEEVKCVWVHGPIIVGAGPSGLAVAACLSHHGLPYVILERSHCINSLWQHRTYDRLKLHLPKHFCQLPFMPFPHHFPKYPSKNQFISYLHSYAQRFNIRPRFNQSVHTAHFDPVSQFWVVRTNDFQYISPWLVVATGENADPVIPSILGMDSFHGPIVHTSAYKSGSHYKNKRVLVIGCGNSGMEVSLDLCRHNATPYMVARNTVHVLPREMFGFSTFGMAMGLLKWLPIKLVDKVVLALAGLMLGDTARYGVRRPKTGPIELKLVSGKTPVLDVGQVAQIRSGNIKVMEGVKEITRNGAKFMDGQEKEFSAIILATGYKSNVPTWLKSRESFTKDGMPKTPFPMGWKGENGLYTVGFTGRGLLGSASDAVKIAEDIADQWMSVKDKSCLNSHMILLKST 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02915 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 177 201 - -
Vimu10g02915 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Vimu10g02915 408 PRINTS Pyridine nucleotide disulphide reductase class-II signature 138 146 - -
Vimu10g02915 408 SUPERFAMILY FAD/NAD(P)-binding domain 21 213 IPR036188 -
Vimu10g02915 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Vimu10g02915 408 PRINTS FAD-dependent pyridine nucleotide reductase signature 181 199 - -
Vimu10g02915 408 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 212 - -
Vimu10g02915 408 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Vimu10g02915 408 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 17 390 - -
Vimu10g02915 408 SUPERFAMILY FAD/NAD(P)-binding domain 179 391 IPR036188 -
Vimu10g02915 408 Gene3D - 20 391 IPR036188 -
Vimu10g02915 408 FunFam Flavin-containing monooxygenase 20 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02915 Vimu-Chr10 40231194 40233659 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02915 K11816 - gmx:100789347 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02915 10 40231194 40233659 Vimu10g02915 10 40231194 40233659 ECH
Vimu1g02562 1 37058561 37060798 Vimu10g02915 10 40231194 40233659 PCT