Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02895 ATGAAAATGAGTACTCTGAATGAAGCATACCTAGAACACCCTCTTACCCTTGGTGATATCGTTCCCATAGACTTTTCCTCTTCCCTGAGTTTACCCGATTCCCACACATGGTCTCAACCCATTGATGTTGATGATGATTTCTCATTGAAGAATCCTGCATCATCACCCATGCCCATCATAGACTTGATGGATCCCAATGCCAAGAAACTCATAGCCCTTGCATGTGAGAACTTTGGTGGCTTCCATTTGAAGAATCATGGAATACCCTTGGCTGTCATTCAAGGTGCTGAAGATGAACTCCAACGCCTCTTCTCTCTCCCGACTCAACAAAAGATGAAGGCTCTCAGATCGCCCGCTGGTGCCACTGGATATGGCATCCCAAGGATTTCACCTTTCTTCCCCAAGTTCATGTGGCACGAAGGATTCACCATCATCGGTTCTCCCTCTCACGATGCAAAAAAGTTATGGCCCAATGATTATCAACAATTTTGTGACAAAATAGAGAACTATCAGAAGGAAATGAATACTTTAGCGGAGAGTCTAACAAAAATGGTGTTGGACGTGTTGGAGATTCCTGAGGAGAAAAGGAAGTGGATGGGTACAAGCGACGTGAGCACCCTTCTGCAGTTGAATTTCTACCCAAGTTGTCCCGAACCGAACCGAGCCATGGGTTTGGCTCCTCACACTGACAGTTCTATCTTCACAATTGTTAATGTTAAAGAAAGTGGTCTTCAACTCATGAAGGAAGGAAAGTGGATCCCTGTGCAGCCTCCGCCCGACACTCTCCTTGTTCACGCCGGCGATTTTCTGCACATGATGTCCAATGGACGCTTCTGCAGCCCACTTCATCGCGTTGTCTCGACTGTCAGCAAGAAACGTTTCTCCATTGCTTATTTCTATTCTCCACCCACAGATTATGTGGTGTCTCCATCGCTGACCGGAGATCTTGATGTTGCTCGTTTTCGTGATGTGACTGTGATGGAGTATATTGGGATCAAGGCTGAGAATTTTGGAAAATCCCTCTCTGTCATTAGCACTTGA 1041 0.4592 MKMSTLNEAYLEHPLTLGDIVPIDFSSSLSLPDSHTWSQPIDVDDDFSLKNPASSPMPIIDLMDPNAKKLIALACENFGGFHLKNHGIPLAVIQGAEDELQRLFSLPTQQKMKALRSPAGATGYGIPRISPFFPKFMWHEGFTIIGSPSHDAKKLWPNDYQQFCDKIENYQKEMNTLAESLTKMVLDVLEIPEEKRKWMGTSDVSTLLQLNFYPSCPEPNRAMGLAPHTDSSIFTIVNVKESGLQLMKEGKWIPVQPPPDTLLVHAGDFLHMMSNGRFCSPLHRVVSTVSKKRFSIAYFYSPPTDYVVSPSLTGDLDVARFRDVTVMEYIGIKAENFGKSLSVIST 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02895 346 Coils Coil 160 180 - -
Vimu10g02895 346 SUPERFAMILY Clavaminate synthase-like 25 337 - -
Vimu10g02895 346 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 203 302 IPR005123 -
Vimu10g02895 346 Gene3D - 29 337 IPR027443 -
Vimu10g02895 346 Pfam non-haem dioxygenase in morphine synthesis N-terminal 58 157 IPR026992 -
Vimu10g02895 346 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 57 329 - -
Vimu10g02895 346 Pfam 2OG-Fe(II) oxygenase superfamily 208 302 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02895 Vimu-Chr10 40085127 40086275 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02895 71 329 Glycosyltransferase AT5G59530 27.636 5.62e-29 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02895 K04124 - gmx:100818754 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02895 10 40085127 40086275 Vimu1g02553 1 36957376 36957858 PCT