Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02837 ATGCAACCCCAGCAGAGCTCAAGAATTGATTTGGGTGAATTGAAAGCACAGATTGTAAAGAAGCTTGGAGCGGATAAGTCAAAGCGGTACTTTTATTGCTTGAACAGGTTTTTGAGTCAGAAACTGAGCAAAACTGAGTTTGATAAGTTTTGTTTCCGAGTGCTTGGGAGGGAGAATCTTCCATTGCACAACCATTTTATAAAGTCAATTTTGAAGAATGCCTGCCAAGCCAAGATCCCACCACCAATCCATCCGTCAGGTCCCCAGAAGTTTGGAGAACATGCTTCAGACATATCTCCTGGTAGAGAAGATGGGCATGAACAAAGTGTTGGCAGCTTCCACAATCAGAATCAAAAAGCTCCCGTTTGGTCAAATGGGATTTTGCCGGTATCCCCTAAGGTTAGGCCTGGCATACGTGAGCGGAAGCTGAGAGATAGACCAAGCCCTCTTGGACCAAATGGGAAGGTTGATTCTGTTTCTCATCAATCCATGGGTACAGAAGATTGTGGTAGTAAGGTTGATATGGAGAATGGAATTCTTACTCCTAGTGATTATCAGACACCTATGCAGCATCTTCAAGCTGTTGCTGAGCTACCTGAGTATGAAAGAGGAGATGCTGATCGGCGACCTGTAGAAAAGCCAAGAATACATGGGAAAGGGCCAGCTGAAATGTCAATTGTTGAAGAGGGGGAAGAAGTGGATCAGTTAAATCGCTTCGGTCTTTCTAAAAGTCCCTTGATAGCACCACTTGGGATTCCTTACTGCTCAGCAAGTGTAGGAGGAGCCCGCAAGGCATTGCCAGTGAGTAGTGCTGGCTATTTTGATAGTTGCTGTGACAGTGGCAGGTTGTCTGATACAGAAACACTCAGGAGGCGCATGGATCAGATTGCTGCAGTACAAGGTCTTGGAGCCATTTCTATGGAATGTGCAAATATGTTGAATAATATGTTGGATGTCTACTTGAAACGGTTGATCAGGTCTTGTGTTGATTTAGTTAGAGCTAGGTCTACAAATGAGCCGAGGAAGACCCCTGCCCCCAGACAGCAGATGCAGGGTAAGGTCATCAATGGCATGTGGCCAAACAATCATTTACACGTGCAGTGTGATGGTGCGTCAGCAGAAGCTGTGTCAGAACATAGACCACCGTGCTTAGTTTCTTTGCATGACTTTAAAGTTGCCATGGAACTAAATCCACAGCAACTCGGAGAAGATTGGCCACTGTGGTTGGAAAAAATATCCATGCAATCGTTTGAAGAATAA 1260 0.45 MQPQQSSRIDLGELKAQIVKKLGADKSKRYFYCLNRFLSQKLSKTEFDKFCFRVLGRENLPLHNHFIKSILKNACQAKIPPPIHPSGPQKFGEHASDISPGREDGHEQSVGSFHNQNQKAPVWSNGILPVSPKVRPGIRERKLRDRPSPLGPNGKVDSVSHQSMGTEDCGSKVDMENGILTPSDYQTPMQHLQAVAELPEYERGDADRRPVEKPRIHGKGPAEMSIVEEGEEVDQLNRFGLSKSPLIAPLGIPYCSASVGGARKALPVSSAGYFDSCCDSGRLSDTETLRRRMDQIAAVQGLGAISMECANMLNNMLDVYLKRLIRSCVDLVRARSTNEPRKTPAPRQQMQGKVINGMWPNNHLHVQCDGASAEAVSEHRPPCLVSLHDFKVAMELNPQQLGEDWPLWLEKISMQSFEE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02837 419 PANTHER TRANSCRIPTIONAL ADAPTER 1 1 418 IPR024738 GO:0070461
Vimu10g02837 419 MobiDBLite consensus disorder prediction 82 114 - -
Vimu10g02837 419 MobiDBLite consensus disorder prediction 139 168 - -
Vimu10g02837 419 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 4 332 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02837 Vimu-Chr10 39663525 39664784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02837 - - gmx:100819343 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02489 1 36126600 36127850 Vimu10g02837 10 39663525 39664784 PCT