Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02603 ATGTTGCATAGAGCCGCAACCAGTGCATATTCATGGTGGTGGGCGAGCCACATCAGGACAAAACAATCAAAATGGCTGGAACAAAGTCTCCAAGATATGGAGCATGTGGTGGCCGAAACCCTCAACATCATTCATAATGAAGGAGAATCATTTTCCCAAAGGGCAGAAATGTACTATAGGAAGAGGCCACAGCTGATAGGTTATGTAGAAGAAGTCTTTCGAGCATATAGAGCATTGGCACAGAGATATGATCGTATATCAAAGGAACTTCAAAGTGCCAACCGCACCATTGCCACTGTTTTCCCAGAACAAGTCCATTATGGAATAGATGAGAATGATGATGAAGAAAGTTTCCGTGGAACAAAGTCATCATCATCTAAAAACCCCATCAATCAAACACCAAAAAAGGGCATTCCTAAACCTCCAGATATACCGAACGATTTTAGAAAACGATATCCAGTTAGGAGGATTGCTAGCTCTGCAAAATCTCCTCCTATTAGTCCTACTTCAGGTCTGAGTACGGCTGAAGCACTAGAAGAAGTTGACAAGCTTCAGAAAGAAATTTTGGCACTGCAGACAGAGAAAGAATTTGTAAGGAGCTTGTATGAGCATTCCTATGAAAAGTATTGGGAAATTGAAGACAGGATTACAAATATGCAGAGAAGAGTTTGCAATTTTGAAGATGAGTTTGGCATTAATAATATCATAGAAGATAATGATGCACGAGCTTTGATGGAAGCAACTGCTCTAAATTCATGCAAAGAAACCCTGCTTATGTTGCAAGAGGTAAAGGCACAATCATCTGAAGAGGCTAAAGAATCGTATCAAATGATTGAGGAAGCTCAAGGCAAGCTTAAAATCCTCAGAGATGGATTCTTTTCTGAAGATAAAAGTGAACAAGACCGAAAAAGCACAGAGGAAGAAGATGTATTTAGCTTGGAAAAAGAAATGCATGAGTGTGAAATCAATGAAAAGCTTGAGAAAGATTCAGGTAGTTCCCTCACTTTGGCAGAAATGGCTGACAAGATTGATGATCTTGTAAATAAGGTTGTTACGCTGGAAACTGCAGTCTCTTCTCAGACTGGCTTAGTAAAGAGACTGAGATCAGAAGCAGAAGAACTTAAAAAAATTGCACTCGTCTTGGAAGAGGATGAAGAAATGCTGATAGAAGATTCAGAAGAAACCTCAAAGAAGCTGGAAGAAGTTGAAGAAAAGTTGAAGAGAGCTAAAACTCTCAATCAAAGAGTCAAAAGGCGAGGCAACAGCCTCCAAAGACTCTTTACTAGCGCTAATTTTGAGCTTGAATATCTTTCAGGAAAAATAAATAATGTGAAGCCAGATGAGGAGGGAGAGAACTTGCTACTTTACAAAAACAGAAGTGCATCAGATGTAGAACTAAAAGAGGAGCCTGAAAAACTAGGTGATGATAACACAGAAACCAAGCAGGATCTTAAGACTATAAAAGAGGAAAAGGAAGACTACAGTGTGAATCTTGGTGATGTTAGAAATGAAGATAACGAGTACAATTTGAATAAAAGTGTTGATTTAATGATTGAAGACATTCCAGAGTTAATTCCGCTGAATAAGGATGATTTTTCTGGGTCAAAGAGTAATCTTGACACTGAATCACTCGATCAGGTAACTGGTGAGAAGGATCAAACTAAGTGGAGTCAGATATTTGCAAGTGGATTGGATGACAGAGAAAAGATTCTGTCGGAATTCAATTCAGTTTTAAAGAACTACGAGGATGTAAAGGGCAAACTCAATGATGCGGAGAAGAAAAATCAGGACAACATTTTGGAGTTGTCACATCAGATAAGGGAGTTGAAGGATACTGTTGAAACTAAGGAAAAAGAGATCAACATTTTACAGCAGAAGCTGACCTGCTCTGAAACAAATCCTGAAGAAAGTCCTCGCATCACTCTCCCAGATTATAACCACACACCACAAGAAGCACTTCTTGGAATTGCACCTCATGAAACAGAGACACAGGACACAGGAAATCCAACTTCAAACACAGGTGCAGGTAGTACTTCTGATGCAGATCACCACCACCAATGTGTTGATAAAAGAACAAAGATTGGCATACTAGTGAAGGTGACATCTAGCCAGCATAACAGGAGCCGTTCACTTTCAATCTTGGAGAAGAAATTTCGTTCAGCCATTAATATATTGCTAGAGGAGAACCTTGAGTTCTGGTTGAGGTTCAGCACCTCAGTGCACCAGACACAGAAGTTCCATGATTCCATAGAGGACTTAAAATGTGAGCTTAAAAGCATAAGGGACGACAATATGTCCCACGAGAACTTAAATATCATGCATTCTGAAATAAAAGCAATAATTAAACACCTGACAGAGATAAGAACTGAGTTATTACTATGGCTGGATCACAGTGAGATTTTGCATGAAGAGTTACAACGTAGGCACCCATCATTGTGCACCTTACAAGATGAAATAGCAAGAGCAGCAAATCCAAATTGTGCATCAAATATGGCAGAACTTAGTGGGTATCAGGCTGCAAAGTTTCAAGGTGAGGTTCTCAATATGAAGCAGGAGAACAAGAAGGTTTGTAGTCAACTACAAGCAGGTATCGTTTTTGTGAAGGGATTGAAAGGCCAAGTTGATAAGATGCTACAAGAACTGAGTAAAGAAATAGGGGTTAACAATCAAGACCAAATTACAAAACGATCCACAAGTCGTGCTAGAATACCCTTGAAGTCTTTTCTGTTTGGTGTCAAGTTAAAGAAACAAAGGCAACAAGTCATTGAATGTGATAGTCCAGCAGGGCAAAGACAATACAGTGATCTAGCAACTGATGATGATGACCTTGACTAG 2835 0.3944 MLHRAATSAYSWWWASHIRTKQSKWLEQSLQDMEHVVAETLNIIHNEGESFSQRAEMYYRKRPQLIGYVEEVFRAYRALAQRYDRISKELQSANRTIATVFPEQVHYGIDENDDEESFRGTKSSSSKNPINQTPKKGIPKPPDIPNDFRKRYPVRRIASSAKSPPISPTSGLSTAEALEEVDKLQKEILALQTEKEFVRSLYEHSYEKYWEIEDRITNMQRRVCNFEDEFGINNIIEDNDARALMEATALNSCKETLLMLQEVKAQSSEEAKESYQMIEEAQGKLKILRDGFFSEDKSEQDRKSTEEEDVFSLEKEMHECEINEKLEKDSGSSLTLAEMADKIDDLVNKVVTLETAVSSQTGLVKRLRSEAEELKKIALVLEEDEEMLIEDSEETSKKLEEVEEKLKRAKTLNQRVKRRGNSLQRLFTSANFELEYLSGKINNVKPDEEGENLLLYKNRSASDVELKEEPEKLGDDNTETKQDLKTIKEEKEDYSVNLGDVRNEDNEYNLNKSVDLMIEDIPELIPLNKDDFSGSKSNLDTESLDQVTGEKDQTKWSQIFASGLDDREKILSEFNSVLKNYEDVKGKLNDAEKKNQDNILELSHQIRELKDTVETKEKEINILQQKLTCSETNPEESPRITLPDYNHTPQEALLGIAPHETETQDTGNPTSNTGAGSTSDADHHHQCVDKRTKIGILVKVTSSQHNRSRSLSILEKKFRSAINILLEENLEFWLRFSTSVHQTQKFHDSIEDLKCELKSIRDDNMSHENLNIMHSEIKAIIKHLTEIRTELLLWLDHSEILHEELQRRHPSLCTLQDEIARAANPNCASNMAELSGYQAAKFQGEVLNMKQENKKVCSQLQAGIVFVKGLKGQVDKMLQELSKEIGVNNQDQITKRSTSRARIPLKSFLFGVKLKKQRQQVIECDSPAGQRQYSDLATDDDDLD 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02603 944 MobiDBLite consensus disorder prediction 661 685 - -
Vimu10g02603 944 MobiDBLite consensus disorder prediction 532 551 - -
Vimu10g02603 944 Coils Coil 364 419 - -
Vimu10g02603 944 Coils Coil 599 633 - -
Vimu10g02603 944 Coils Coil 76 96 - -
Vimu10g02603 944 Coils Coil 174 201 - -
Vimu10g02603 944 Pfam KIP1-like protein 11 84 IPR011684 GO:0003779
Vimu10g02603 944 Coils Coil 477 504 - -
Vimu10g02603 944 Coils Coil 336 356 - -
Vimu10g02603 944 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 10 90 IPR011684 GO:0003779
Vimu10g02603 944 MobiDBLite consensus disorder prediction 111 147 - -
Vimu10g02603 944 Coils Coil 574 594 - -
Vimu10g02603 944 PANTHER PROTEIN NETWORKED 2D 1 938 - -
Vimu10g02603 944 Coils Coil 750 770 - -
Vimu10g02603 944 MobiDBLite consensus disorder prediction 661 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02603 Vimu-Chr10 37429559 37433768 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02603 - - gmx:100805236 1162.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02603 10 37429559 37433768 Vimu10g02603 10 37429559 37433768 ECH
Vimu1g01677 1 16885497 16889161 Vimu10g02603 10 37429559 37433768 PCT