Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02493 ATGAAGAAGACGAAGAACCCCACACTCCGAGTAAAAATAACGAGTTTCCGCGTTTCCTGGGTGAGTGTAGAGAGAAGAGGACCAATGCAGCAGAAGCGTCGGACGGTTCCACTGGGTATGCTCAGAAGGTTTCTCGCCGCCTCAATATTCTCCATAGTTGTCACTTCTTTCTTCTTTGTTCACGTTCACGTTTCTCCTTCGCCCACTCATCACAACTTCAGTGACAAGATCCCCTCGTTTTATGACCCGCATAGCTGGACTCGAGAACTCGTTCCGCCCTATCTATTCAAGACTCCGTTCTCTGTTCCCAAGTTGAAGGATTCAAGAAAGGAGTCAGACTACGAGAAATTGTGGAAGCCTCCACCAAATCACGGGTTTATACCCTGCACGAAGCCTACTCCTAATTACACAACTCCGACAAGGTCACGGGGTTACCTTTCAGTTCATACAAATGGAGGGCTAAACCAAATGCGTTCTGGGATATGTGATATGGTAGCCATAGCTCGTATCATAAATGCTACTCTTGTGATTCCAGAACTCGATAAAAAATCATTTTGGCATGATACTAGCAATTTCTCTGATATCTTCGATGATGAGTGGTTTATTAGTTCTCTAGCTAATGATATAAAGATCATTAAGAAGCTTCCGAAGGAACTTGTTAAAGCAACCAAAATCGTCATGCAATTCAAAAGTTGGTCTGGTATGGATTACTATGAGAATGAGATTGCTGCCTTGTGGGATAGTTTCAATATAATTCGAGCTTCAAAATCTGATTCTCGGTTAGCAAATAACAATCTACCTCCAGATATTCAGAAGCTTCGCTGCCGTGCTTGTTATGAAGCTCTTCGTTTCTCTCCTCGTATTGAAAAAATGGGAAAAACATTGGTGGAGAGGATGAGGTCATTCGGTCCCTATATTGCATTGCATTTACGTTATGAGAAGGACATGCTTGCATTTAGTGGGTGCACACATGAATTATCTAAAGTTGAATCTCAAGAGCTACGGTTTATCAGAGAGAATACTACTTACTGGAAAAGAAAATACATTAATCCCATAGAAGAGAGGTCCAAAGGGTTTTGCCCCTTAACTCCAAAGGAAGTTGGAATTTTTCTCACTGCTCTTGGATACCCATCAAAGACTCCAATTTATATTGCCGCTGGGGAGATATATGGGGGTGAGTTTCATATGGCTGACCTGCGATCCCGCTATCCACTGTTAATGAGCAAGGAAAAGTTGGTATCCATGGAAGAGCTTGAACCCTTTTCTAGTCATGGGTCTCAAATGGCTGCTCTGGACTATATTGTATCAGTTGAAAGCGACGTGTTTGTACATTCTTACCCTGGAAACATGGCGAAGGCCGTTGAAGGCCATCGTCGATTTCTCGGGAGAGGAAGAACAATATCTCCTGACAGGAAAGCGCTTGTTCGTTTGTTTGATAAACTGGAAAATGGATCAATGACCGAGGGGAAAACACTGTCTAATAAAGTTATCGATCTCCACAGAAGACGGCTTGGCTTCTTCAGAAAGAGAAAAGGACCCGTTTCTGGAACAAAGGGCTTGGACAGGTTTCGTTCAGAAGAAACATTTTATTCAAACCCTTTACCAGGTTGTTTATGTCGGACGGAATCACTCTCTGTAAACGCTTCTCGGTATAGGTAG 1659 0.4292 MKKTKNPTLRVKITSFRVSWVSVERRGPMQQKRRTVPLGMLRRFLAASIFSIVVTSFFFVHVHVSPSPTHHNFSDKIPSFYDPHSWTRELVPPYLFKTPFSVPKLKDSRKESDYEKLWKPPPNHGFIPCTKPTPNYTTPTRSRGYLSVHTNGGLNQMRSGICDMVAIARIINATLVIPELDKKSFWHDTSNFSDIFDDEWFISSLANDIKIIKKLPKELVKATKIVMQFKSWSGMDYYENEIAALWDSFNIIRASKSDSRLANNNLPPDIQKLRCRACYEALRFSPRIEKMGKTLVERMRSFGPYIALHLRYEKDMLAFSGCTHELSKVESQELRFIRENTTYWKRKYINPIEERSKGFCPLTPKEVGIFLTALGYPSKTPIYIAAGEIYGGEFHMADLRSRYPLLMSKEKLVSMEELEPFSSHGSQMAALDYIVSVESDVFVHSYPGNMAKAVEGHRRFLGRGRTISPDRKALVRLFDKLENGSMTEGKTLSNKVIDLHRRRLGFFRKRKGPVSGTKGLDRFRSEETFYSNPLPGCLCRTESLSVNASRYR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02493 552 PANTHER OS02G0726500 PROTEIN-RELATED 43 540 - -
Vimu10g02493 552 Pfam GDP-fucose protein O-fucosyltransferase 145 460 IPR019378 -
Vimu10g02493 552 FunFam O-fucosyltransferase 28 276 470 - -
Vimu10g02493 552 CDD O-FucT_plant 145 466 IPR024709 -
Vimu10g02493 552 PIRSF UCP009360 11 542 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02493 Vimu-Chr10 36117720 36121447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02493 84 542 Miscellaneous Gene Families AT1G22460 65.359 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02493 - - gmx:100807411 946.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02493 10 36117720 36121447 Vimu10g02493 10 36117720 36121447 ECH
Vimu1g01916 1 24396419 24402040 Vimu10g02493 10 36117720 36121447 PCT