Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02380 TCAACAGTGAATGGCACTGGATCTTTGATTGAGATCGTGTACGTGTTGATCTTCATCGTGTTGGCCCCCAAAAAGCAGAAGGCTAAAATTCTTGGTCTCTTCACCTTCGTGCTCTCTGTGTTCTCTGCTGTTGTTTTTGTGTCCCTTTTTGCCCTTCACGGCAATTCAAGAAAGCTCTTCTGCGGTTTTGCTGCTGCAATATTTTCCATAATCATGTATGGCTCTCCACTCTCTATTATGGTACCTAATGGTGTTGGTTCTGCTTTGGGGGCAATGCAACTGATATTGTATTTCATATACCGAGACAATAAAGGTGATGCAGTGAAAAAATCCCCAACGGTGGAGGAATTCATGGAGATGGGAGATGCAAAACCCCAACAAGGGAAGCAATCCAATGCAAATGGAACTCAAGGATGA 417 0.4365 STVNGTGSLIEIVYVLIFIVLAPKKQKAKILGLFTFVLSVFSAVVFVSLFALHGNSRKLFCGFAAAIFSIIMYGSPLSIMVPNGVGSALGAMQLILYFIYRDNKGDAVKKSPTVEEFMEMGDAKPQQGKQSNANGTQG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02380 138 MobiDBLite consensus disorder prediction 119 138 - -
Vimu10g02380 138 Gene3D - 24 111 - -
Vimu10g02380 138 PANTHER RAG1-ACTIVATING PROTEIN 1 2 80 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02380 Vimu-Chr10 34686398 34687329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g02380 1 80 Miscellaneous Gene Families AT1G21460 70.000 3.05e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02380 K15382 - gmx:100800304 206.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02380 10 34686398 34687329 Vimu10g02380 10 34686398 34687329 ECH
Vimu1g02407 1 34883030 34886155 Vimu10g02380 10 34686398 34687329 PCT