Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g02313 ATGATAGCTCGCGCTGTCTGCACGTGCCACATGGTGTTCTCCGCCGACCGGATTACTCCGACCGTCGTGTCTGTGTTCTCTGGCATTGACAACATCAGACTGTTGCCTTTCCGCTTCCAACTTCGAAGGAACACACACCTCCTCAGTGCTCAACTTTCCAATTCTTTCTCCAATTTCGGATTTCATTCTCACTCTCAGTGTTTGAATTCCGTTCAATCGCATGTTCCATCACGGTTGCCTTGGATGGGTCCATTTCCGGGTGATATTGCTGAAGTGGAGGCATATTGTAGGATCTTTAGGAATTCTGAAAGCCTTCATTCTGCTTTAGTGGATGCCTTGTGTAACCCGATCACTGTCGAATGTAGTGTTTCCTATGAAGTTCCGTCTGACGAGAAACGGCTTCTAGAGGATAAAATAGTATCTGTCCTTGGATGCATTGTGGCCCTTGTGAATAGTGGGAGGCGGGATCTTCTTTCTGGAAGATCATCGATTGTGACTCCCTTTCGTGCTGCAGAGGTTGGTGCGATGGAGGATACACTTCCTCCACTTGCCCTTTTCAGGAGCGAGATGAAGAGGTGTTGTGAGAGCTTGCATGTTGCTCTTGAGAACTATTTAGTTCCTGGTGATGATCGGAACTTGGATGTCTGGAGGAAACTTCAGAGACTGAAGAATCTGTGCTATGATTCTGGCTTTCCTCGTGGAGAGGATTGTCCATGTCCTTCGCTGCTCGCGAATTGGAGTCCTGTGTGTTTATACACTCCCATAGAGGACATGGAATCCAAAGAATCTGAAGCAGCTTTTTGGACAGGCGGGCAGGTAACGGAAGAAGGTCTAAAGTGGTTACTTAATAAAGGATATAAGACCATCATAGATCTCAGAGAAGAAGATGTAAAAGATAGCTTCTATCAAGCAGCTGTGTATGATGCTATTTCATCTGGAAGTATTGAGTTGGTCAGGATCCCTGTTAAAGATGGGACTGCACCTACGATGGAACAGGTTGAGAGGTTTGCATCTTATGTTTCAAATTGCAGTAAAAGACCAATTTATCTTCATAGCAAGGAAGGAATTTGGAGAACATCTGCCATGGTCTCTAGATGGAGGCAGTACATTACACGTACTACATCAGAGCTTGTTTCTAATCAATCAGTTATTTCCAGTGTCGTGTTATCAGATTCCACAAATGGATCTGGAAAAATGGAGGACTCAATGATTGCCGAGGGGTCCTTCCAGGAAAAGGATACCAATTTGCTGCGCGAGGGTGCGACACATGGTTCTGCTGCCTCCTTTGACTCATGTAACTCTTTAAAGACGAATAATGAAAAAACAAAAAGCAATGGGGGCATAAGTCAACTTACTGCTGATAGTTCGGCCTCATCACAAGTCACTGGTGCTTCTGGGGAAGGATCTTTTCCAAGTTTCTCCAGTAAAATTAACCCTTTAGAAGCTCAAATTCCTCCTTTTGATATTTTTTCCAAAAGGGACATGTCCACATTTTTGGGAAGTAGGAAGATGTCAAAACCCTGTTATTTCAGTTATCAGGTTAAAAGAGTGGAATGTCTGCCAGAGTCAAGGAGCTTTGAACCTAAAATTGTGGGCCGAGCGAAAAGTTCCAATGGGTCAGCGAGTATGAGTAATTCCCATTCTGCCAGGACAACAATTAATGGGTATAGTGAGGGGGAAATGAATTACAGGGCTGATGCCAATATCTCTACTACTGTGAACAATGATATTGATAATGTGAATACTAACTCCCAAAGGACGGGAGATGATAAAGATAAGGCTAGGTTAGCCTTACGAGATGAAGACTTGGGGCTTATTGAAGGAGACATGTGTGCATCATCAACTGGGGTGGTAAGGGTGCAGTCGAGGAAGAAAGCAGAGATGTTCTTAGTACGGACGGATGGATTTTCTTGTACAAGAGAGAGGGTGAGTGAATCCTCTTTGGCCTTTACTCATCCCAGCACCCAACAACAGATGCTATTATGGAAATCTACGCCAAAAACTGTTTTAGTGTTGAAAAAGCTAGGAGATCATCTCATGGAAGAAGCTAGAGAGGTTGCTTCTTTTCTGTATTACCAAGAGAAAATGAATGTATTTGTGGAACCAGATGTGCATGATATATTTGCAAGCATTCCTGGGTTTGGATTTGTCCAGACCTTCTATAGTCAGGATACTGGTGATCTACACGAGAAAGTGGATTTTGTAGCCTGTTTGGGGGGAGATGGTGTTATACTGCATGCTTCGAATCTGTTCAGAGGTGCTGTTCCCCCTGTTGTGTCATTTAACCTTGGTTCTCTTGGTTTCCTGACTTCCCATAATTTTGAAGACTACAAGCAGGACTTACAACAAATTATCCATGGTAATAGTGCACAAGATGGAGTGTACATCACTCTAAGAATGCGTCTTCGATGTGAAATTTTTCGAAACGGTAAAGCTGCACCAGGGAAAGTATTTGATATTCTCAATGAGGTACAAGCTGATGGAGTCATTGTGGCCACCCCTACTGGAAGCACTGCCTATTCTACAGCTGCTGGAGGTTCCATGGTCCATCCAAATGTTCCGTGCATGTTGTTTACCCCAATCTGTCCACATTCGCTCTCATTTAGACCAGTCATACTTCCAGACTCTGCACAACTTGAATTGAAGATTCCACAGGACGCAAGAAGCAATGCCTGGGTTTCATTTGATGGAAAGAGAAGGCAGCAACTTTCAAGAGGAGATTCGGTACGAATATCTATGAGTCAGTATCCACTTCCAACAGTTAACAAGTTTGATCAAACAGGTGATTGGTTTCATAGCTTAATTCGCTGCCTAAATTGGAATGAAAGGCTTGATCAAAAGGCTCTATAA 2850 0.4358 MIARAVCTCHMVFSADRITPTVVSVFSGIDNIRLLPFRFQLRRNTHLLSAQLSNSFSNFGFHSHSQCLNSVQSHVPSRLPWMGPFPGDIAEVEAYCRIFRNSESLHSALVDALCNPITVECSVSYEVPSDEKRLLEDKIVSVLGCIVALVNSGRRDLLSGRSSIVTPFRAAEVGAMEDTLPPLALFRSEMKRCCESLHVALENYLVPGDDRNLDVWRKLQRLKNLCYDSGFPRGEDCPCPSLLANWSPVCLYTPIEDMESKESEAAFWTGGQVTEEGLKWLLNKGYKTIIDLREEDVKDSFYQAAVYDAISSGSIELVRIPVKDGTAPTMEQVERFASYVSNCSKRPIYLHSKEGIWRTSAMVSRWRQYITRTTSELVSNQSVISSVVLSDSTNGSGKMEDSMIAEGSFQEKDTNLLREGATHGSAASFDSCNSLKTNNEKTKSNGGISQLTADSSASSQVTGASGEGSFPSFSSKINPLEAQIPPFDIFSKRDMSTFLGSRKMSKPCYFSYQVKRVECLPESRSFEPKIVGRAKSSNGSASMSNSHSARTTINGYSEGEMNYRADANISTTVNNDIDNVNTNSQRTGDDKDKARLALRDEDLGLIEGDMCASSTGVVRVQSRKKAEMFLVRTDGFSCTRERVSESSLAFTHPSTQQQMLLWKSTPKTVLVLKKLGDHLMEEAREVASFLYYQEKMNVFVEPDVHDIFASIPGFGFVQTFYSQDTGDLHEKVDFVACLGGDGVILHASNLFRGAVPPVVSFNLGSLGFLTSHNFEDYKQDLQQIIHGNSAQDGVYITLRMRLRCEIFRNGKAAPGKVFDILNEVQADGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSAQLELKIPQDARSNAWVSFDGKRRQQLSRGDSVRISMSQYPLPTVNKFDQTGDWFHSLIRCLNWNERLDQKAL 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g02313 949 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 669 944 IPR016064 -
Vimu10g02313 949 MobiDBLite consensus disorder prediction 534 553 - -
Vimu10g02313 949 Pfam ATP-NAD kinase C-terminal domain 821 922 - -
Vimu10g02313 949 Gene3D Protein tyrosine phosphatase superfamily 259 388 IPR029021 -
Vimu10g02313 949 Gene3D - 634 827 IPR017438 -
Vimu10g02313 949 MobiDBLite consensus disorder prediction 535 553 - -
Vimu10g02313 949 MobiDBLite consensus disorder prediction 428 477 - -
Vimu10g02313 949 Pfam ATP-NAD kinase N-terminal domain 729 787 IPR002504 GO:0003951|GO:0006741
Vimu10g02313 949 FunFam NAD kinase 2, chloroplastic 656 821 - -
Vimu10g02313 949 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 261 369 IPR029021 -
Vimu10g02313 949 PANTHER NAD KINASE 290 824 - -
Vimu10g02313 949 Hamap NAD kinase [nadK]. 666 940 IPR002504 GO:0003951|GO:0006741
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g02313 Vimu-Chr10 33771935 33781788 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g02313 K00858 - gmx:100796381 1543.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g02313 10 33771935 33781788 Vimu10g02313 10 33771935 33781788 ECH
Vimu1g02316 1 33676204 33680042 Vimu10g02313 10 33771935 33781788 PCT