Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01774 ATGATGAGTTGGTGCAGCGAAGATTTATACAAACGTAGATTGCCAAGAAGCAAAGCAAAAGATGCAGACAAGCCTTTCCATTTATCAGTCCAAGATAGAAGCTCAAGATGCAAGTTGTCTTTCTTAAAACTCATACTATTGATAACCATAAGTGGCACTTTTGTAACACTTCTGTATTCTCCAGAGGTTTACAATACCAACCATTTATCAACCTCAGGATCTCGGTGGATATGGGGTGGCTCAGATCCTCGGTACATATCCAATGTACACACTGACTGGGATGACATACTGAATATTACGGATAAGCTGACAGGTGAAGATGAACTTCAAGGAATTGGGCTTGTAAATTTCAACAAGACCGAACAAGTCCATTGGGAACATCTTATTCCTGATGCAACACATGTTGTTCTGCCTTTGGAGTATGCGGCAAGAAATGTGACATGGGAATCCTTGTACCCGGAATGGATTGATGAGGAAGAAGAAACTGAAGTTCCTGTTTGTCCTTCTCTGCCTACTATTAGACCCCCAGGCATAAGACTTAACCTCATCGCCGTGAAGCTTCCTTGCAGGAATGGAGGGAACTGGTCCAGAGATGTTGCTCGTCTGCATCTTCAGCTTGCAGCTGCTGGCCTTGCAACCTCTTTCAAAGGCAACTACCCCGTTTATGTGCTCTTCATCACCAACTGCTTTCCAATACCAAATCTGTTTTCATGTAAAGAACTAGTTGGGCATAAAGGGAATGTGTGGTTATACAAACCAAACTTGAGTGTGTTGAGAGAAAAAGTTCAGCTTCCAGTAGGGTCTTGTGAACTTGCACTTCCAATGAGAGGCAAAGAGTTGGCTTACAATGGGAATGCTCCTAGAGAAGCCTATGCAACAATTCTACACTCAGCTCATGTTTACGTTTGTGGAGCTATAGCTGCTGCACAAAGCATCCGCATGTCTGGATCAACTCGAGACTTTGTAATACTTGTTGATGAGACGATCAGTGGCTATCACAGAAGTGGTTTGGAAGCAGCAGGATGGAAAGTTAGAACAATACAAAGGATCAGGAACCCCAAAGCTGAAAAAGATGCTTACAACGAATGGAACTACAGCAAGTTCAGGCTGTGGCAGTTGACAGATTATGACAAGATAATATTCATTGATGCAGATTTGCTCATACTGAGAAATATAGATTTCCTATTTGGAATGCCAGAAATCACCGCCACTGGAAACAATGCCACTCTCTTCAACTCCGGTGTTATGGTGGTTGAGCCATCAAATTGCACATTCCAGCTCCTGATGGATCACATAAACGAGATTGAGTCCTACAATGGAGGGGACCAAGGATATTTGAACGAAATATTTACATGGTGGCACAGGATACCAAGACACATGAACTTCTTGAAGCATTTTTGGATTGGTGATGAGGAAGAGAAGAAACAAATGAAGACTTTGTTGTTTGGCGCGGAGCCTCCAATTTTGTATGTCCTGCATTATCTAGGTGTGAAGCCATGGTTATGCTTCCGGGACTATGATTGCAACTGGAATGCTGATATCTTTCATGAATTTGCAAGTGATGTTGCGCATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGCTTTTGCAGCAGTTTTGTCTGCTGAAATCAAAGCAGAAGGCACAGTTGGAGTGGGATCGTAGGCAGGCTGAGATAGCAAACTACACGGACGGTCATTGGCGAATAAAAGTTAAAGATAGACGCTTGAAGAAATGTATAGATAATTTGTGCAACTGGAAAAGCATGTTGCGGCACTGGGGAGAGACAAATTGGACAGATGATGAGTTTTATACTCCAACACCACCTACCATTACCACAGCATCTCTTTCGGCTTTATGA 1866 0.4298 MMSWCSEDLYKRRLPRSKAKDADKPFHLSVQDRSSRCKLSFLKLILLITISGTFVTLLYSPEVYNTNHLSTSGSRWIWGGSDPRYISNVHTDWDDILNITDKLTGEDELQGIGLVNFNKTEQVHWEHLIPDATHVVLPLEYAARNVTWESLYPEWIDEEEETEVPVCPSLPTIRPPGIRLNLIAVKLPCRNGGNWSRDVARLHLQLAAAGLATSFKGNYPVYVLFITNCFPIPNLFSCKELVGHKGNVWLYKPNLSVLREKVQLPVGSCELALPMRGKELAYNGNAPREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDFVILVDETISGYHRSGLEAAGWKVRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWIGDEEEKKQMKTLLFGAEPPILYVLHYLGVKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPELLQQFCLLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDRRLKKCIDNLCNWKSMLRHWGETNWTDDEFYTPTPPTITTASLSAL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01774 621 FunFam Hexosyltransferase 286 538 - -
Vimu10g01774 621 SUPERFAMILY Nucleotide-diphospho-sugar transferases 288 534 IPR029044 -
Vimu10g01774 621 PANTHER GLYCOGENIN SUBFAMILY MEMBER 195 581 - -
Vimu10g01774 621 CDD GT8_Glycogenin 289 534 - -
Vimu10g01774 621 Pfam Glycosyl transferase family 8 295 501 IPR002495 GO:0016757
Vimu10g01774 621 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 287 536 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01774 Vimu-Chr10 24860196 24862812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01774 2 621 Glycosyltransferase AT3G18660 66.562 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01774 K20890 - gmx:100780439 1240.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01774 10 24860196 24862812 Vimu10g01774 10 24860196 24862812 ECH
Vimu10g01774 10 24860196 24862812 Vimu11g04166 11 63258937 63260774 ECH
Vimu11g04166 11 63258937 63260774 Vimu10g01774 10 24860196 24862812 PCT