Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01756 ATGGTGAGGCTCTTAGGATTGAATCGTGGGGAGGTCGATGAACCCAGGGAAATTGCGTCGAGGTCTAATTTGACAAGCGAGTCCAGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCATCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACCTGTACAAGCATGACCACTCCGGGGTGCGTGATTACCTGTGTAATAGAATGTACACACTTCCCTTGCACGGAATTGAGAGTTATTTGTTCCAAGTATGTTACATGATGATACACAAGCCAAGTCCATCTTTGGATAAGTTCGTCATAGACGTGTGCTCCAAGTCGCTCAAGATTGCTTTGAAGGTGCATTGGTTCTTATTGGCAGAGCTTGAGGACTCCGATGATAATGAAGGAATTAGTAGGATTCAAGAAAAGTGCCAGATTGCAGCCACCTTAATGGGTGAGTGGCCGCCCTTGATAGGGCCTCAAAGTGCTTCTACAACCCCTGGAGGCAAGAGCCAAGTTTTGCATAAGATATTCTCATCAAAACAGCGATTGTTGTCACTAACATCTTCACCGCCTACTCAGAGGTCTATGTCATTCTCACCTTCATCAGGAAACAATTTGCAGGAGGATGGTAGTCAGCAATCTACTGAGGAAAACAATTTATTTAAGAAGTTTATGCCAGGTCCAAAAGTTAGAGATGCTTTGCTTTTTAGAAAGTCAGTGGAGAAAGATGATGACGAGTCTGAAAAAGATGGTTTCTTCAAGAGGCTTTTAAGAGATAGCAAGGGTGAAGATGAGTTGGGCCAGAAGATTCGTGATGCTTTTGTCTTTCGTAAGTCTTCTGAGAAGTGTGACGAAGATTCTGAAAAGGATAATTTCTTTAAAAGGTTCTTAAGGGATGGTAGAGGGGATGATGAAGAATCTGAAAGGGATGGTTTCTTTAAAAGACTCTTAAGAGACAGTAAAGGTGAGGATGAGGATTTGCCCTCTAGTTCAGAAGGATTCTTTAAGAGATTGTTTCGTGATAACAAGAATGATTCTGAGGATAGAACACCCAATAAGACAATGGAGGATGAAGATAAAGAGGGTTTTTTCCGAAAGTTTTTCAGAGAGAAGTCTGAGGATAAGAAGGATGGGAATGACGAAGGAGATATTGCAAATTCCGAAGAGAAATGTGCAAAGCCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGAAAATTCTTTAAGGATAAATTTGACGACAAGAAAGATACAAGTGACAAAATTGAAGATGGTACAACCAATGTTGAGGAAGAACCCTCTGAATTTTCTTTGTTCAAAAGAATTTTCCGTGTGCATCCTGAAGACAGTAAAAGTAGTTCAGCCACTGAAAACAATGGTGGGGTGTATGAAAGTAGTCCGGGTACAGAGAATTTTTTTCGTAAATTGTTTAGAGACCGTGATCGATCAATTGAAGATTCTGAGCTATTAGGGTCAAAAAGGCAGAAAGAGAAGCATCCTGGATCACCAAAGCAGCAAAATGAGAAATCAGGAACAAAACCCCCGCTTCCAATTAATCCATCGCAGTTCCGGAAAGGAGCTTACCATGAATCATTGGATTTTGTGCTGACGTTATGTGAGACATCGTTTGGTCTAGTGGACGTATTTCCAGTAGAAGACCGTAAAGATGCCCTGCATGAGTCACTTGCAGAGATCAATTTACATTTAATAGAGGCTCACAATATTGGAGCTGGGGTTAAAAGAGAGATTTCAAAAGATAGAGGAACAAAGCTGGTTAAGGAAATGAAAGGAATATAG 1779 0.4115 MVRLLGLNRGEVDEPREIASRSNLTSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHSGVRDYLCNRMYTLPLHGIESYLFQVCYMMIHKPSPSLDKFVIDVCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIGPQSASTTPGGKSQVLHKIFSSKQRLLSLTSSPPTQRSMSFSPSSGNNLQEDGSQQSTEENNLFKKFMPGPKVRDALLFRKSVEKDDDESEKDGFFKRLLRDSKGEDELGQKIRDAFVFRKSSEKCDEDSEKDNFFKRFLRDGRGDDEESERDGFFKRLLRDSKGEDEDLPSSSEGFFKRLFRDNKNDSEDRTPNKTMEDEDKEGFFRKFFREKSEDKKDGNDEGDIANSEEKCAKPAEEDEKEGFFRKFFKDKFDDKKDTSDKIEDGTTNVEEEPSEFSLFKRIFRVHPEDSKSSSATENNGGVYESSPGTENFFRKLFRDRDRSIEDSELLGSKRQKEKHPGSPKQQNEKSGTKPPLPINPSQFRKGAYHESLDFVLTLCETSFGLVDVFPVEDRKDALHESLAEINLHLIEAHNIGAGVKREISKDRGTKLVKEMKGI 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01756 592 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 181 210 - -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 441 461 - -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 480 517 - -
Vimu10g01756 592 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 333 393 - -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 408 427 - -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 480 498 - -
Vimu10g01756 592 Gene3D - 44 146 IPR042236 -
Vimu10g01756 592 MobiDBLite consensus disorder prediction 446 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01756 Vimu-Chr10 24553508 24556015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01756 1 571 Lipid Metabolism Gene Families AT5G64070 63.062 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01756 K19801 - gmx:100781715 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01756 10 24553508 24556015 Vimu10g01756 10 24553508 24556015 ECH
Vimu11g04181 11 63380368 63390383 Vimu10g01756 10 24553508 24556015 PCT