Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01051 ATGGCAGAAGGGGCTGCAAGCGAAGTCGCCGATCCCATCGCCGTCGCCGCCGTAGACATGGACGTCGAGAAACCCGGCGAAAACGGTAGCGAGACTAACGAGAAGCGTTCCAGGGAGGACGAGGAGCCCCTGGCGGACGACGTTTCGAAGAAGCAGAAGGTGGACGAGGAAAAGTCCGTAGAGGAGCAACGACTGGAGAATAGCAATGATCAGGAAGGAGAAGGAAAGGAAACAGAGGAAGATAAAATGGCCGAAGCAGAAGCAGAAGGAAAAGAAGAGGATGCCGCAAGTGTTTCCGTGAAGTTGGGATACAAGAGCTTCGGTTCTTCCTCGGAGATGTACCATTACTTCTTCAACATACTTCATCACTGGCCTCAATATATCAATATTAACAAGTATGAACATGTAATGTTGTTGGAGTTGCTTAAGAACGGCCATGCAGAGCCTGAGAAAAAGATGGGTGGAGGGGTTCGCGCTTTCCAAGTTCGCAAGCATCCTACCTACCAAAGTAGGTGCTTTTTCCTCATCAGGGAAGATGACTCTGTTGATGATTTTAGCTTCAGGAAGTGTGTGGATCACATTCTTCCCTTACCAGATGGGATGCATTTGAAATCTGACGCGAATAAGGAATTTGGTGGTAATGGTGGTGGGGGAGGAAAGGGTGGCAGAGGTTGGCGTGGTGGAAGAGGTGGGCGTGGTGGAAGAGGCGGACGGGGTGGAAGAGGCGGGCGTGGTGGAAAAGGTGGTCATGGAGGTCCGGTTTGGTGGCTCAAGTGTGACCCACCTACAATACGCATAGTGGTCGTTTTCGACGTGGAGAGTCACGAGTTCCAGTTGCACGGAGGAGTGACATAG 855 0.5146 MAEGAASEVADPIAVAAVDMDVEKPGENGSETNEKRSREDEEPLADDVSKKQKVDEEKSVEEQRLENSNDQEGEGKETEEDKMAEAEAEGKEEDAASVSVKLGYKSFGSSSEMYHYFFNILHHWPQYININKYEHVMLLELLKNGHAEPEKKMGGGVRAFQVRKHPTYQSRCFFLIREDDSVDDFSFRKCVDHILPLPDGMHLKSDANKEFGGNGGGGGKGGRGWRGGRGGRGGRGGRGGRGGRGGKGGHGGPVWWLKCDPPTIRIVVVFDVESHEFQLHGGVT 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01051 284 MobiDBLite consensus disorder prediction 24 95 - -
Vimu10g01051 284 MobiDBLite consensus disorder prediction 210 252 - -
Vimu10g01051 284 MobiDBLite consensus disorder prediction 1 95 - -
Vimu10g01051 284 Pfam Protein of unknown function (DUF3223) 119 191 - -
Vimu10g01051 284 PANTHER PROTEIN EMBRYO DEFECTIVE 514 31 211 IPR044673 -
Vimu10g01051 284 FunFam Predicted protein 96 194 - -
Vimu10g01051 284 Coils Coil 51 96 - -
Vimu10g01051 284 Gene3D - 95 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01051 Vimu-Chr10 9796803 9800688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01051 - - vra:106757256 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01051 10 9796803 9800688 Vimu10g01051 10 9796803 9800688 ECH
Vimu7g00854 7 8390912 8396104 Vimu10g01051 10 9796803 9800688 PCT