Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00908 ATGAAAAAAGTGAGCATGAAGAAGGCTTTAAAGTTGTCAAAATTCAGTGGTGAACTTAAGGGACTAGATGCAGCAATTGCTAAGGCAACTAGCTATAAGCATGCATTACCAAAGGAAAAGCACATTCGTAGGAACTTGACTCTTCAATTTTTGAAGAGCTTCTCCACTTTCGTAATGCAAAAGGTTACATCATTGACTTCTCATTCTTTTATGGAAAATCGGCCCCCAGCGAAATATAGTGAAAAGCTTGACACCAAAATCTTGTTGGAGCAATTGCCAGCCTTACAAAATCTCCTCTCCAGACTTCTAGATTGCAGGGTTGCTGGTGAAAGTGTCAAACTATATGTTGCAATAACTATTAGAGTGGTTGAATTGCTCGACAAGTTTTTCGAGATGTACCATGATGATGCTCGTAGTTCACTTCGAATTTATAAAAAATCAGTGACTCAGCCTCCTGCTTTTTTTATTACTACCATGGAGGAATATATTAAAGAGGCTCCAAGCTCCTTAATGCTTGAAGACAACAGGGTATGA 534 0.3858 MKKVSMKKALKLSKFSGELKGLDAAIAKATSYKHALPKEKHIRRNLTLQFLKSFSTFVMQKVTSLTSHSFMENRPPAKYSEKLDTKILLEQLPALQNLLSRLLDCRVAGESVKLYVAITIRVVELLDKFFEMYHDDARSSLRIYKKSVTQPPAFFITTMEEYIKEAPSSLMLEDNRV 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00908 177 PANTHER CLATHRIN ASSEMBLY PROTEIN 50 150 IPR045192 GO:0048268|GO:0072583
Vimu10g00908 177 SUPERFAMILY GAT-like domain 79 165 - -
Vimu10g00908 177 Pfam ANTH domain 53 150 IPR011417 GO:0005543
Vimu10g00908 177 Gene3D - 1 76 IPR008942 -
Vimu10g00908 177 Gene3D ANTH domain 84 168 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00908 Vimu-Chr10 8102019 8105683 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00908 K20043 - vun:114162899 147.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g01073 7 10549761 10554183 Vimu10g00908 10 8102019 8105683 PCT