Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00372 ATGGTGCTCAGGTACTTAACTGATCAACTGACAAAAGTTCAAATAGTTAACGACGTTAATAAGGATTTTGTTATCGAGGCACTGAGATCTATTGCGGAGTTGATCACATATGGCGACCAACATGACCCAAGTTTTTTTGATTTCTTCATGGAAAAGCAAGTTGTGGGAGAGTTTGTACGTATACTTAATCTCAGCAAAAGTACTAGTATTCCACTTCAGTTACTACAAACAGTGAGTATTATGATCCAGAACCTAAGAAGTGAACATGCTATATATTATATGTTTAGTAATGAACATATGAATTACCTAATTACATATTCATTTGATTTTCGGAACGAAGAGCTACTGTCATACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAGTACAATTTCTCTGCTTGTGAAGACTCACGATGAGGAAGTAGTTTCATTTCCACTGTATGTTGAGGCAATTCGCTTTGCCTTTCATGAGGAGAACATGGTTCGCACTGCTGTACGTACTGTGACCCTTAATGTTTATCATGTTGGGGATGAATGTGTTAATAGATATATAACGAGTGCACCTCGCACAGAATACTTCTCAAACCTGGTTTCGTTTTTTAGGAATCAGTGTATGGATTTAAATAGACTGGTGTCTGAGGCACTCAAAAATCAAGGCTCAGATTCAACCTCTGCAATAATTGCTGCTGTAGATGAAATTGAGGATAACCTGTATTACTTTAGTGATGTTATCTCTGCTGGGATTCCTGATGTTGGGAGGTTAATAACAGACAGCATTTTGATGCTTCTGGTTTTTCCATTACTTCTTCCTTCCCTGAGAACACTGGACTCTAATGACATGCAAAGTGGGGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTAAGGATAGTCAAGATCAAAGATTTGGCAAATACCATAGTCGCTGCTCTTTTTTATCCCTTTGAGACCTTTACAAAATTTTCTGGGGGAAAAGTCAATGGCTATACATCTGATAGTGGTTTTACATCCGTAAGCCAAGAATCAGATGAGAATAGTGCAAAGTGCAAAGCAGAACACTTGACAGTGGAAGTGCCAAATTCTACTAGCTCTTCAGACTTATACCCTGAAAGTGTTATGTCAGAAAATAATCGTAGCAGTTCAAATTTGACATTGAGGGAGCTTTTGCTTGCATATGTTACCAAAGGGCATGATGTACAAGTTTTGGGTTCTCTGAGTGTGCTTGCTACTTTACTGCAAACTAAAGAACTTGATGAATCTATGCTAGACAAGCTTGGAATTCTTCCACAACGAAAACAGCACAAGAAGCAGTTATTGCAAGCTTTGGTTGGTGAGGCTTCAGGTGAAGAGCAGCTTTTTTCCTCTGAAAATAGCTGGATGAGGGATAGCATTGGCTGCGAGCTCAGTACCTATCTTGAAAAGATTAAGGAGCTGTATGGGTTATCTTTTCTCTGCTCTGATCTTGTCACAAGCCCTCGCGTGCCTAGATTTCAGGTGCTTGATGCGTTAGTTAGCCTCTTTTGTCGTTCTAATATTTCCGCAGAGACATTGTGGGATGGTGGTTGGCTTTTACGCCAGTTACTTCCTTACAGTGAAGCAGAATTCAATAGTCAACACCTGGAATTGCTGCAAGTTTCGTACAAGAATTCTGCTACTGCTCTTGTAAAGGAGGTTAGAGGCTTCTGGCCCGATCTTCTTATTACTGTTCTTTGCAATGAATGGAAAAAATGCAAAAGAGCGATGGAGTCATCTTACCCTCCAAAAGAACCAAAATGTGTACTTTTTCCTTCTCCAATATTAGCTTCAGAAGACGATATACCTGACAGCTCATCATTTGCTGCTGGAGAAAGACTGCATGAATTGGCAAAGGTATTTGTAGTTCTGCACCAACTTCAAATATTCACTCTAGGTAGACCTTTGCCTGAGAAACCTCTTATTTATCCTCCTGGTGATCTCCCAGCGAATTCTCGTGCTCAGACATCTGGACTTGATTTGTCAGGCCCTAAACCAGGAACTGAAGTCAACCTTGTTAATGCTGTGCCTTGTAGAATTGCTTTCGAAAGGGGCAAAGAGCGCCATTTTTCCTTTCTAGCAATCACTGTAGGAACGTCCGGGTGGCTTGTACTAGCAGAAGAGTTGCCATTAAAGAAGCCCTTTGGCGTTGTTCGGGTTGCTGCACCTTTGGCTGGGTGCAATCCCAAGATTGATGATAAACACTCAAGATGGTTACATCTGCGGATTAGACCATCTTCTTTACCTGTTCTGGATCCTGCCAAGTTCAATACCCAGGGAAAATTAAAGTCAAAAGCTTTTGTGGATGGAAGATGGACGTTGGCTTTCAGGGATGAGGAGTATTGCAAGTCTGCTTTATGCATGATTGTTGAGGAGATTAATTTTCTGTGTGACGAGGTTCACAGAAGACTAAAACCATTGCTCAACCTTGAAACCTCATTGAATTTAGCAGGTCTTGCAGACGAGGATTCCTCTTCAAGTACAACACCTCGAAACTCGGTGTAA 2532 0.406 MVLRYLTDQLTKVQIVNDVNKDFVIEALRSIAELITYGDQHDPSFFDFFMEKQVVGEFVRILNLSKSTSIPLQLLQTVSIMIQNLRSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKSTISLLVKTHDEEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDECVNRYITSAPRTEYFSNLVSFFRNQCMDLNRLVSEALKNQGSDSTSAIIAAVDEIEDNLYYFSDVISAGIPDVGRLITDSILMLLVFPLLLPSLRTLDSNDMQSGVVTSLYLLCCILRIVKIKDLANTIVAALFYPFETFTKFSGGKVNGYTSDSGFTSVSQESDENSAKCKAEHLTVEVPNSTSSSDLYPESVMSENNRSSSNLTLRELLLAYVTKGHDVQVLGSLSVLATLLQTKELDESMLDKLGILPQRKQHKKQLLQALVGEASGEEQLFSSENSWMRDSIGCELSTYLEKIKELYGLSFLCSDLVTSPRVPRFQVLDALVSLFCRSNISAETLWDGGWLLRQLLPYSEAEFNSQHLELLQVSYKNSATALVKEVRGFWPDLLITVLCNEWKKCKRAMESSYPPKEPKCVLFPSPILASEDDIPDSSSFAAGERLHELAKVFVVLHQLQIFTLGRPLPEKPLIYPPGDLPANSRAQTSGLDLSGPKPGTEVNLVNAVPCRIAFERGKERHFSFLAITVGTSGWLVLAEELPLKKPFGVVRVAAPLAGCNPKIDDKHSRWLHLRIRPSSLPVLDPAKFNTQGKLKSKAFVDGRWTLAFRDEEYCKSALCMIVEEINFLCDEVHRRLKPLLNLETSLNLAGLADEDSSSSTTPRNSV 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00372 843 PANTHER UNCHARACTERIZED 3 822 IPR039272 -
Vimu10g00372 843 Pfam Uncharacterised conserved protein 28 178 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00372 Vimu-Chr10 2678089 2690105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g00372 K19513 - gmx:100789779 1434.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00372 10 2678089 2690105 Vimu10g00372 10 2678089 2690105 ECH
Vimu7g01388 7 13271655 13279052 Vimu10g00372 10 2678089 2690105 PCT