Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03682 ATGGATGATAGACCTCCAAAATTAAAAATCATTCCGGATCACTTTCAAATTCCAACATCAAGTATAGAATCTGCTGAGAGCGGAAAATCGTCTACTACTGAAGAACCTGGAGTTGATCAACCTTTTAGGCCCTCGCTCCAGCTGTGGACTCCAAGAAAATTTAGGAAAACTTTCATGTTGAATTTGTTTACTCTACGGAGATTGTCATGGGGGTCCGATACTGGAGGTCGGGAAAAGGTTGAGCTAACAGCTGCCGAAGTAGAATCACTTCGATCGGAGCTTGCTGATTTAGAAGAAAGGGAAGCTCACTTGAAAGCTCAGTTGCAACATATTGATGAAGTTCTGCGGTCAGCTCGTCTATCAGGCTATTTACACATTAGAACTAGATGGTCAGCACTTCCCGGAGAGCCCGAACCTATAGATGATACTGAAGTAGATGATCGGCTTCCACGCTTTGTCGTTCTCCATGGAGCATGTATATTCTTATATTTGTTGTGTACAGATATAAGTCCTCAAGACTCTACCCTTTTATCTGATATTCTTGAAGTAGGGAGATTGCCAAGTTTTAAGCATGAAAATGATGATATTCAATATGCTTTTTATATTTTAACTCGTCATGGATATCGCTATGAGTGCTCAAGCAAGTCTATGATTCAGGTGGACTCTTGGTTAACAGCTTTAGAAAGTTACAGCAAATTAGAATCTGATAGAGCAGCTCCTAATGGTTAG 729 0.406 MDDRPPKLKIIPDHFQIPTSSIESAESGKSSTTEEPGVDQPFRPSLQLWTPRKFRKTFMLNLFTLRRLSWGSDTGGREKVELTAAEVESLRSELADLEEREAHLKAQLQHIDEVLRSARLSGYLHIRTRWSALPGEPEPIDDTEVDDRLPRFVVLHGACIFLYLLCTDISPQDSTLLSDILEVGRLPSFKHENDDIQYAFYILTRHGYRYECSSKSMIQVDSWLTALESYSKLESDRAAPNG 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03682 242 MobiDBLite consensus disorder prediction 1 42 - -
Vifa6g03682 242 Coils Coil 80 114 - -
Vifa6g03682 242 MobiDBLite consensus disorder prediction 17 38 - -
Vifa6g03682 242 SUPERFAMILY PH domain-like 112 230 - -
Vifa6g03682 242 PANTHER OS05G0595500 PROTEIN 1 231 - -
Vifa6g03682 242 CDD PH 151 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03682 Vifa-Chr6 1210012878 1210016626 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03682 - K00940 mtr:25502183 418.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03682 6 1210012878 1210016626 Vifa6g03682 6 1210012878 1210016626 ECH
Vifa1g07982 1 1245947974 1245957811 Vifa6g03682 6 1210012878 1210016626 PCT