Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03587 ATGAAAAACTCAGAAAAACTGATTTGGGAACAAATGAAGAGTCCTAAATCTGGCACCCCTATTGGAAATGGAGGTGTATTAGTAACTGCATCTGCACATTCCAGAACCTCTCATAAACTTCTAGTCTTACTCATCCTCTTCGTTTCCATTACCTACGTTCTCTACTCGCTTAAGCTCGTCTCAACTTCACGCGCTTGCCGAGAAAATACACTCTTCTCCTCCACCGACACTAAACTCTCTGCTTCCGTCAATGCCACCGCAACAACCACCACCACCGCCATCCGCCTCAACGACGACGACGACAAGACGCAACTCCGCCACGTAGTTTTCGGAATCGCGGCATCGGCGAAGCTATGGGAGCAGAGAAAGAACTACATTAAGCTTTGGTACAGATCAAAGGACATGCGTGGTGTAGTGTGGCTGGACAACAAAGTGAGAACGGAGAAAAACGAGAGTCTCCTCCCTCCGGTGAGAATCTCCGGCGACACATCGAAATTCGCTTACAAGAACAAGCAAGGACACCGGTCAGCTATCAGAATCTCGCGAATCGTAACCGAGACGCTTCGTCTTGGAATGAAAGACGTGCGGTGGTTTGTAATGGGAGACGACGACACCGTTTTCGTGACGGATAATTTAGTTAGGGTTTTGAGAAAGTACGATCACAATCAATTTTATTACATCGGAAGTTTATCGGAGAGTCATTTGCAGAATATTTTCTTCTCGTACAATATGGCTTACGGTGGCGGTGGATTTGCGATAAGCTATCCTTTGGCGAAAGCGCTGAGCAAGATGCAAGATCGGTGCATTCAGAGGTATCCGGGATTGTACGGTTCCGATGATAGAATGCAAGCTTGTATGGCGGAACTCGGTGTTCCACTCACTAAAGAAACCGGGTTTCACCAGTATGATGTGTATGGGAACTTGCTCGGTCTTCTTGGATCTCATCCCGTGACTCCGTTAGTGTCACTGCACCACCTTGACGTGGTTGAACCAATCTTCCCGAATGTGACTCGTGTAGAAGCACTCCAGCGGTTAACAATACCAATGAAGCTTGACTCTGCAGGGCTTATGCAACAATCCATCTGCTACGATCCATCAAAGAGCTGGACTGTTTCTGTTTCATGGGGTTTTGCCGTTCAGATAATTCGCGGCGTTTTCTCACCCCGGGAGATGGAAATGCCTGCAAGAACATTCTTGAATTGGTACAAAAGAGCAGATTACACTGCATATGCATTCAACACGCGACCTGTTAGTCGTCATCCATGCCAGAAGCCTTTTGTATTTTACTTCTCAAAGGCAAACTACAATGATACAATGCAGCAAACACTGACAGAATACGAAAAGCATCGAGTCCCTAACCCAGAATGTCGGTGGAAGATGGCCAACCCTTCTTCTATTGAGCGAGTAGAGGTACATAAGAAGCCAGATCCACAACTATGGAATAGGTCTCCAAGGAGAAACTGTTGCAGAGTTATGAAGTGGGAGAAGAAAGGAACCATGGTGATAGATGTGGGTGTGTGTAGGGAAAATGAGGTAAGTGAAGCATAG 1548 0.4658 MKNSEKLIWEQMKSPKSGTPIGNGGVLVTASAHSRTSHKLLVLLILFVSITYVLYSLKLVSTSRACRENTLFSSTDTKLSASVNATATTTTTAIRLNDDDDKTQLRHVVFGIAASAKLWEQRKNYIKLWYRSKDMRGVVWLDNKVRTEKNESLLPPVRISGDTSKFAYKNKQGHRSAIRISRIVTETLRLGMKDVRWFVMGDDDTVFVTDNLVRVLRKYDHNQFYYIGSLSESHLQNIFFSYNMAYGGGGFAISYPLAKALSKMQDRCIQRYPGLYGSDDRMQACMAELGVPLTKETGFHQYDVYGNLLGLLGSHPVTPLVSLHHLDVVEPIFPNVTRVEALQRLTIPMKLDSAGLMQQSICYDPSKSWTVSVSWGFAVQIIRGVFSPREMEMPARTFLNWYKRADYTAYAFNTRPVSRHPCQKPFVFYFSKANYNDTMQQTLTEYEKHRVPNPECRWKMANPSSIERVEVHKKPDPQLWNRSPRRNCCRVMKWEKKGTMVIDVGVCRENEVSEA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03587 515 FunFam Fringe-related protein-like 95 350 - -
Vifa6g03587 515 Pfam Protein of unknown function, DUF604 236 489 IPR006740 -
Vifa6g03587 515 Gene3D - 95 351 - -
Vifa6g03587 515 PANTHER FRINGE-RELATED 37 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03587 Vifa-Chr6 1178265383 1178268961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03587 3 515 Glycosyltransferase AT4G23490 65.465 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03587 - - gmx:100818244 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03587 6 1178265383 1178268961 Vifa6g03587 6 1178265383 1178268961 ECH
Vifa1g07944 1 1239493265 1239496374 Vifa6g03587 6 1178265383 1178268961 PCT