Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07944 ATGAAAGACTCAGACAAAATAGTACTCACTCCAACACACCAACAACGAACCTCAAATCCACACTCACCAAAGCTCTTCATGCTATGGCTCATCCTCGCTGTCTCCCTCACCTACTTCATCTACACTCTCAAACTCGTCTCCACTTCAACCACCTGCAACCACTCTCCACTCTCCATCAACCTCCACTCCTCCACCACCACCACCAACACCAACACTTCCAAACTCACCTCAACAACTCCGCACAAAACACACCTCAAACACGTAGTATTCGGAATCGCCGCCTCCTCAAAACTCTGGCCACAAAGAAAAAACTACATAAAACTCTGGTACAACAATAACACCATGAGAGGAATAGTCTGGATGGATGACGAGACAGTAAAAACAGATCCAAACGAAGGTCTACCAATGAATATATATTTTTCTTATGGAATGGCTTATGGTGGTGGTGGATTCGCCATTAGTTACGGATTGGCGAAAACGCTTGTGAAAATGCAGGATCGTTGTATTCATAGGTATCCCGGACTTTATGGTTCCGATGATCGAATGCAAGCTTGTATGGCGGAACTCGGTGTTCCACTCACCAAAGAAATCGGTTTTCATCAGTATGATGTGTATGGGAACTTATTTGGGCTTCTTGCAGCTCATCCAGTGACTCCATTGGTATCACTACACCATCTTGATGTGGTTGAGCCGATTTTCCCCAATGCCACTAGAGTTGAAGCACTTCAACGCCTTACGGTTCCAATGAAACTGGATTCAGCAGGACTCATTCAACAATCCATTTGCTACGACAAGGAAAAGAAATGGACTATTTCAGTTTCATGGGGTTTTGCAGTTCAGATATTTCGCGGGATATTTTCGCCTCGCGAAATTGAAATGCCTTCAAGAACATTCCTTAATTGGTACAGAAGAGCTGATTACACTGCATATGCTTTCAACACACGGCCGGTTACACGAAATCCGTGTCAGAAGCCTTTTGTGTTTTACCTTTCAAAGGCGGAATTCAATTCTACAATACATCAGACAGTGAGTGAATATGAAAGGCACCGTGTTCCTCATCCAGAATGTCGATGGAAAATCTCTAACCCGTCTGCTCTCGATAAGATAATTGTATATAAGAAACCAGACCCACATCTATGGGATAGGGCTCCAAGGAGAAACTGTTGTAGAGTGATGAAGTCAAACAAGAAAGGAAGAATGGTGATGGATGTTGGTATATGTAAAGATGGCGAGGTCAGCGAACCTTGA 1248 0.4375 MKDSDKIVLTPTHQQRTSNPHSPKLFMLWLILAVSLTYFIYTLKLVSTSTTCNHSPLSINLHSSTTTTNTNTSKLTSTTPHKTHLKHVVFGIAASSKLWPQRKNYIKLWYNNNTMRGIVWMDDETVKTDPNEGLPMNIYFSYGMAYGGGGFAISYGLAKTLVKMQDRCIHRYPGLYGSDDRMQACMAELGVPLTKEIGFHQYDVYGNLFGLLAAHPVTPLVSLHHLDVVEPIFPNATRVEALQRLTVPMKLDSAGLIQQSICYDKEKKWTISVSWGFAVQIFRGIFSPREIEMPSRTFLNWYRRADYTAYAFNTRPVTRNPCQKPFVFYLSKAEFNSTIHQTVSEYERHRVPHPECRWKISNPSALDKIIVYKKPDPHLWDRAPRRNCCRVMKSNKKGRMVMDVGICKDGEVSEP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07944 415 Gene3D - 129 247 - -
Vifa1g07944 415 Pfam Protein of unknown function, DUF604 137 389 IPR006740 -
Vifa1g07944 415 PANTHER FRINGE-RELATED 29 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07944 Vifa-Chr1 1239493265 1239496374 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07944 137 414 Glycosyltransferase AT4G23490 77.698 1.08e-172 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07944 - - gmx:100795943 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07944 1 1239493265 1239496374 Vifa1g07944 1 1239493265 1239496374 ECH
Vifa1g07944 1 1239493265 1239496374 Vifa6g03587 6 1178265383 1178268961 PCT