Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03582 ATGGCAGCGACAACTACAACTAAAACAACCTCAAATTTCCTCAAACCCATAAACCATAAAAACCAACAACCCTCCACCAAACCCAAACGTCGCAAGTGTCGCGAAACCACCATCTCAACCTCCGCTTCATCTTCCCCCATCAGCCCGACCCAATTACCCGAACCAGAACCCCAACCCCAACCCGGTTCACCTTCTTCTTACACCGTTCGTTTCTCCCCAATCATGGATTTCACACACTCCTCTTCCCCAATCTCAAACTGTCACTCGGGTCAGGACCCGTTCCCATCAAGCTTCACCAAATTCAACTCCGCCCTCACCGCCGGCCTCCTCAACCCAATGTCGCCGCCGCCCGACAAAACCCGCTCATCTCCAACTCTCTTCGAAATGATGGTCAACGAACCCGATATTCATCAAAGAACAACAACAAACCAGATCCCATCTTCGTCTCTTCAGAAACCCCAAATTGTAATCCAAGATCGCGAAACCCTTATGATGCAGCGAATTTCCGATTTGTTAGCTTCCCGGAGCCCTGGGAACCACTTCAACGATTCATCTTCCAGTGATATTAAGCTTACGCTTACTTCCAAAGACGGCTTCAGTTTTTCGATGAACGTGCATCGTCAGATTCTTGTTGCGCATAGTAGGTTTTTCTCTGTCAAGCTTTCTGATCGGTGGACGCAGCAGCAGCAGCAGCGTTCGGGGTTGCCGTATTTGGTTGAGATTGCGGATTGTGATGATGTTGAGGTTTATGTTGAGACTTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGATGCTTATGAAAGAGGATGTTTCTAAGGTTTTGGGTATCTTAAAGGTTTCGGCTGCAATTGGATTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCTCCGTGGGCGGAGGATGAAGAAGACAAGGTGGCGTCGCTTCTGTCGGAACTTCGTCTTGAAGCTGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCAACTGAAGTTGCCAATGGAAATGAAGAGGGGAATGATAATGAAGAAGTCCTTCTTAAACTTATTCGTGTGGTTCTTGAAGGAAAAGATGAGAAGGCCAGGCGAGAGATGAAAGGGTTGGTGTCGAAGATGCTCCATGAAAATGCTTCTCAGAATGATCTTCGGAAGGAGTCATTATACTCGGCATGTGATGATTGTCTGCAGTTACTTCTTCACCATTTTTTGCGGGCTGCGGCTTCAGACCTGCAGGATGTGAGTCAAATTGCACGTCAAGCGGATAATTTGCATTGGATTTTGGATATTTTGATTGATAGACAGATTGCCGAGGATTTCCTGAAAACATGGGCGTCTCAATTAGAATTATCGGAAGCTCATTCTAAGGTGCCTGCAGTTCACAGGTTCGAGGCATCCAAGGGCCTTGATAGGCATCTAATCGAGGACGGTCTTAGTAACACAATTCTCACTCTACCACTCTCATGGCAACAAGAAATTTTATTGGCTTGGTTTAATCGTTTCCTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTCTGGAAGAGGAACGGAGAGCAAGACAGGACAAGACAATTACGAATTACATCTGCATCAATTGAGCAGAGCTGA 1647 0.4627 MAATTTTKTTSNFLKPINHKNQQPSTKPKRRKCRETTISTSASSSPISPTQLPEPEPQPQPGSPSSYTVRFSPIMDFTHSSSPISNCHSGQDPFPSSFTKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMVNEPDIHQRTTTNQIPSSSLQKPQIVIQDRETLMMQRISDLLASRSPGNHFNDSSSSDIKLTLTSKDGFSFSMNVHRQILVAHSRFFSVKLSDRWTQQQQQRSGLPYLVEIADCDDVEVYVETLRLMYCKDLRKMLMKEDVSKVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEDKVASLLSELRLEAVGAGEVLKRVSTEVANGNEEGNDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLHENASQNDLRKESLYSACDDCLQLLLHHFLRAAASDLQDVSQIARQADNLHWILDILIDRQIAEDFLKTWASQLELSEAHSKVPAVHRFEASKGLDRHLIEDGLSNTILTLPLSWQQEILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQDRTRQLRITSASIEQS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03582 548 ProSiteProfiles BTB domain profile. 187 258 IPR000210 GO:0005515
Vifa6g03582 548 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 467 533 IPR038920 -
Vifa6g03582 548 Gene3D Potassium Channel Kv1.1; Chain A 158 300 IPR011333 -
Vifa6g03582 548 MobiDBLite consensus disorder prediction 1 23 - -
Vifa6g03582 548 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03582 Vifa-Chr6 1176489272 1176491551 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03582 - - ccaj:109800730 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03582 6 1176489272 1176491551 Vifa6g03582 6 1176489272 1176491551 ECH
Vifa6g03582 6 1176489272 1176491551 Vifa2g03190 2 916506917 916509234 PCT