Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03190 ATGGAGTCTTCCTATCACCGCCGACGACACCGTACATGGTGTTGCTCTTTCGCCGTCCCGCCGTCAAGCCCAGACAACCCACCGTTCAAACCGCGCAGGCCCAAACCCGAGGCCCAATCCAAGCCCACTCTCTCCTCCTCCGTACCGAACTCCCCTCAGAGCTCCAAATCCACCTGTCGCATTGCCGCTCGGATCGACCCTCGCCGGATCTTATCCCCCGGCAGAGTCTCCCCCATCGAAGACGCTCTTCCCGATCCCTCTCCGCTTCTCGACTCCGCTCCACGATCTCGAAGCTTCCGTGCTCCTGTCACGAACCCCATTCCGCCGCCTCCGATGAACTCCGCCGCTGACGTTAGTGTCGGCGTCAGCGACGGATTCGACGTGAGGATGAGTTTGAGAGGGAAGAACGGTGGGTGTATTGTTTTGGAGCTGAATTCGGTGATTCTTTGCGCTAACTCGGAGGTTTTTGCTGGGTTGATTGGGGATTATAGAAAGGGTAGTTCTTCAAGCGGGAGTAACAAAATGTGTAGAATTGAAGTTCCTGAAGTTGATAATTTGGGAGTTTTTAGAGAAACTATTGAGCTTATGTTTGAAGAGGATGTTCCTAAAAGGCTTCTCAATATTGGTGTTTATCGATCCATTGATGTTTTGGAGGTGTCTGCAGGCATCATGTTCACCAAGGGTGTTTTCTCCTGTTTACAATACCTGGAAGCTGTTCCTTGGACAGAAGAGGAAGAAGAGAAATTAAGGAACCTGTTTACAAGATTTAAGTTCGATGATGAAACTACAAGGGACATCTTAGGAAGGCTTTACTTGCATGATTCGGAAGATTCAAAGCCGAACGTAGCCCGACAACTTGTATGGTCAATCACCACTTGTGTTAATGCCAATGCAAGAAATGAATTGAAATCACTTGTTAAGGGTCTTCTTTGTAAAAGCTCTGTGTACGAGAAGAATCATCTTGACTTAAGCAAAGACGATCTCTATTCAGTTTGCCACTCGTGCATTGACTCGCTGATCAGCCTCTTTGAGGAGGCATCAGGTACCGTCCCTAATGAAAGATTGACAAAGAAAGACACGAATAAACCAATGATCGAACGAATCTCAACACAGGTTGATAACATCAACTGGTTGTTGGAAATAATGCTTGATGGACAAATAGCAGAGGATTTTGTGGATATATGGTCTGATCAGAAACAACTTCTTAAAATGCATGATAATGCATCCCCTATGGTTAGATATGAACTCAGTAGAGTTTCGGCAATTCTGTTTGTTGCCATGGCTACAAGAAAATTGCAATGTCGGATGGAAGTTAGATCGGGGCTTCTCCAAGCATGGTTTGCGCCTATGTTGTTAGACTTTGGTTGGTTGCAAAGATGCAGAAAAGGGCTTGATATAAAGGTTTTGCAAGATGCTATGGGTCAGACACTTCTTACTTTGCCTCTAAAGCAACAACACACTTTGTTCATGGAATGGTTTCATCACTTCTCAAGGCATGGCACTGAATGTCCTAATCTAAGCAAAGCATTCCAAATTTGGTGGCGTAGATCATTTTTAAGAGGGTCTGAAACTCATGCCATTGAATCAAGGTAA 1593 0.457 MESSYHRRRHRTWCCSFAVPPSSPDNPPFKPRRPKPEAQSKPTLSSSVPNSPQSSKSTCRIAARIDPRRILSPGRVSPIEDALPDPSPLLDSAPRSRSFRAPVTNPIPPPPMNSAADVSVGVSDGFDVRMSLRGKNGGCIVLELNSVILCANSEVFAGLIGDYRKGSSSSGSNKMCRIEVPEVDNLGVFRETIELMFEEDVPKRLLNIGVYRSIDVLEVSAGIMFTKGVFSCLQYLEAVPWTEEEEEKLRNLFTRFKFDDETTRDILGRLYLHDSEDSKPNVARQLVWSITTCVNANARNELKSLVKGLLCKSSVYEKNHLDLSKDDLYSVCHSCIDSLISLFEEASGTVPNERLTKKDTNKPMIERISTQVDNINWLLEIMLDGQIAEDFVDIWSDQKQLLKMHDNASPMVRYELSRVSAILFVAMATRKLQCRMEVRSGLLQAWFAPMLLDFGWLQRCRKGLDIKVLQDAMGQTLLTLPLKQQHTLFMEWFHHFSRHGTECPNLSKAFQIWWRRSFLRGSETHAIESR 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03190 530 MobiDBLite consensus disorder prediction 16 112 - -
Vifa2g03190 530 MobiDBLite consensus disorder prediction 39 60 - -
Vifa2g03190 530 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 119 521 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03190 Vifa-Chr2 916506917 916509234 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03190 - - gmx:100777771 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03190 2 916506917 916509234 Vifa2g03190 2 916506917 916509234 ECH
Vifa2g03190 2 916506917 916509234 Vifa2g03190 2 916506917 916509234 PCT
Vifa6g03582 6 1176489272 1176491551 Vifa2g03190 2 916506917 916509234 PCT