Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03387 ATGGGTTTTTGGAAATTGGGTTTTTTAGGGTTTCTTTCTGCTGCTTTTCTCTTTACAGTTAATGCTGTGGAACTTCACAGGAATCAACCTACTGAGAGAATCTCAGGTAGTGCTGGTGATGTATTGGAAGATGATCCGGTTGGAAGGTTGAAGGTTTTTGTTTATGAACTTCCAAGTAAATATAATAAGAAGATTCTGCAAAAAGACCCGAGATGCCTCGCGCATATGTTTGCTGCTGAGATATTTATGCACCGGTTTCTTTTATCGAGTGCTGTTCGGACCTTTAGTCCGGAAGAGGCGGATTGGTTTTATACTCCTGTTTATACAACCTGTGACTTGACTCCAAATGGACTTCCTTTACCGTTTAAGTCACCGCGAATGATGAGGAGTGCTATACAGCTTATTTCTTCGAATTGGCCGTATTGGAACCAGACTGACGGGGCGGATCATTTCTTCGTGGTTCCTCATGACTTTGGGGCATGTTTTCATTACCAAGAAGAGAAGGCAATTGAAAGAGGGATTCTTTCAATGCTAAGGCGTGCTACATTGGTTCAAACGTTTGGTCAGAGAAATCATGTGTGCTTGAAAGAGGGCTCAATTACCGTTCCTCCATATGCTCCGCCTCAGAAAATGCATTCCCACTTAATTCCTGATAAGACTCCCAGGTCCATTTTTGTGTATTTCCGAGGACTGTTTTATGATGTGGGAAATGATCCTGAAGGTGGATACTATGCAAGAGGTGCAAGAGCAGCAGTATGGGAGAATTTTAAGAACAATCCACTATTTGACATTTCTACCGAGCATCCAACAACATATTACGAGGACATGCAACGAGCTGTGTTTTGTCTCTGTCCACTTGGATGGGCTCCTTGGAGCCCAAGGTTGGTTGAAGCTGTGGTATTTGGTTGTATTCCTGTTATTATTGCAGATGATATTGTTCTTCCGTTTGCCGATGCAATACCGTGGGAAGAGATCGGGGTGTTTGTTGATGAACAAGATGTTCCTAAGTTGGATACCATACTCACATCGATCCCACCCGAAGTTATATTAAGGAAACAAAGATTGCTTGCTAACCCTTCCATGAAACAAGCAATGCTATTCCCTCAACCTGCGCAACCTGGAGACGCATTCCATCAAGTTCTGAACGGACTAGCACGAAAGTTGCCCCATGACAGGAGTGTATTCTTGAAACCAGGGGAGAAGAGCTTGAATTGGACTGCTGGCCCTGTCGGTGACCTTAAACCTTGGTAA 1251 0.4365 MGFWKLGFLGFLSAAFLFTVNAVELHRNQPTERISGSAGDVLEDDPVGRLKVFVYELPSKYNKKILQKDPRCLAHMFAAEIFMHRFLLSSAVRTFSPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNQTDGADHFFVVPHDFGACFHYQEEKAIERGILSMLRRATLVQTFGQRNHVCLKEGSITVPPYAPPQKMHSHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKNNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWEEIGVFVDEQDVPKLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQVLNGLARKLPHDRSVFLKPGEKSLNWTAGPVGDLKPW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03387 416 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 48 383 IPR004263 GO:0006486|GO:0016757
Vifa6g03387 416 Pfam Exostosin family 49 344 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03387 Vifa-Chr6 1112280837 1112282651 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03387 K20870 - gmx:100797122 810.061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03387 6 1112280837 1112282651 Vifa6g03387 6 1112280837 1112282651 ECH
Vifa6g03387 6 1112280837 1112282651 Vifa2g03317 2 950643115 950643780 PCT