Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03317 ATGATCTCTTGCCATGACTGGGGACCGGGTCATTTGCATGGTAACATAAGATACTTACTACTCAGTACATGGAAGAACAAAGACGAAAACGTTCAAGTTTACGATGAAGATTCTTATCACACAAAGCTTAGAAGCAGCAGGTTTTGTTTGTGTCCTAGCGGTTACGAGGTGGCTAGTCCGAGAATCGTGGAAGCTATATTTGCCGAATGTGTGCCTGTGTTGATTTCGGATAGCTATGTTCCGCCTTTTAGTGATTTTTTGAATTGGAAATCGTTTTCGGTTCACATAGATGTGAAGGAAATACCTAATATTAAGAAGATACTCATGGGAATTTCAAAGAGACAGTACTTGAAGATGCAGAGAAGAGTAAAACAGGTGCAAAAGCATTTTGTTCCTAACGAGCCACCTAAGAGATTTGATATTTTTCATATGACCATTCATTCTATTTCACTTGGAAGGTTGAACATCCGTATTCATGATGATGATCAGTGA 492 0.3902 MISCHDWGPGHLHGNIRYLLLSTWKNKDENVQVYDEDSYHTKLRSSRFCLCPSGYEVASPRIVEAIFAECVPVLISDSYVPPFSDFLNWKSFSVHIDVKEIPNIKKILMGISKRQYLKMQRRVKQVQKHFVPNEPPKRFDIFHMTIHSISLGRLNIRIHDDDQ 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03317 163 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 11 149 IPR004263 GO:0006486|GO:0016757
Vifa2g03317 163 Pfam Exostosin family 13 109 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03317 Vifa-Chr2 950643115 950643780 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03317 - - aprc:113868893 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03317 2 950643115 950643780 Vifa2g03317 2 950643115 950643780 ECH
Vifa6g03387 6 1112280837 1112282651 Vifa2g03317 2 950643115 950643780 PCT