Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03232 ATGAACCAGGACAATTACTTGGAAGAAGCATTAAAAATGCGCAACCTTCTGGAAGAGTTTAATGAGGATCATGGAGTGCGCTCGCCTACCATATTAGGTGTTCGTGAGCATATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACTAGCTTTGTCACAATTGGTCAAAGAGTCCTTGCAAGACCGTTAAAGGTTCGGTTTCACTATGGTCACCCGGATGTTTTTGATAGAATTTTCCATTTAACCCGTGGAGGAATCAGCAAGGCTTCTTGTGGCATCAATCTGAGCGAGGATATATTTGCTGGATTCAACTCAACACTAAGGCGTGGGAATATTACTCATCATGAGTATATCCAAATTGGAAAGGGTAGGGATGTCGGGCTCAATCAAATCTCTCTTTTTGAAGCAAAAGTGGCATGTGGTAATGGAGAGCAGGTACTAAGCAGGGATATCTACCGGTTGGGGCATCGATTTGACTTTTTCCGCATGCTATCATTTTACTTTACAACTGTTGGATTTTATGTCAGCTCAATGGTAAGCAATACTTGTTTGTGA 573 0.4171 MNQDNYLEEALKMRNLLEEFNEDHGVRSPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHLTRGGISKASCGINLSEDIFAGFNSTLRRGNITHHEYIQIGKGRDVGLNQISLFEAKVACGNGEQVLSRDIYRLGHRFDFFRMLSFYFTTVGFYVSSMVSNTCL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03232 190 Coils Coil 3 23 - -
Vifa6g03232 190 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 186 - -
Vifa6g03232 190 Pfam 1,3-beta-glucan synthase component 1 185 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03232 Vifa-Chr6 1071586084 1071587361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03232 1 186 Glycosyltransferase AT2G36850 84.409 2.93e-108 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03232 K11000 - gmx:100779472 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03191 2 917343367 917356776 Vifa6g03232 6 1071586084 1071587361 PCT