Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g03191 ATGTCGAATCTCGAGCCAGCCACGTCGCAGACGCTGCTTCGACGTCCGTCGAGAAGCGCTGCAATGACCACCTTCTCAATGGAGGTTTTCGACAATGATGTCGTTGTTCCTTCATCCCTCGCCTCGATAACACCCATTCTCCGTGTGGCTAATGAGATTGAAAGTGACCGCCCTAGGGTTGCTTATCTATGTCGATTTTATGCTTTCGAAAAGGCACATAGGTTGGATCAGAGTTCTAGCGGGCGTGGTGTGAGACAGTTTAAAACATTGTTGCTGCAACGGTTGGAGAGGGACAATGCTAACAGTCTTGAATCCCGGACGAAGAAGACAGATGCAAGAGAAATCCAAGCTTATTATCAGCAATACTATGAGAATTATGTCAAAGCACTTGATCAGGGAGAGCAGGCTGACAGAGCACAGCTTGGTAAAGCTTATCAGACCGCCGGTGTGCTTTTTGAAGTGCTTTGTGCTGTCAACAAGACTGAGAAAGTTGAAGAAGTTGCTCCTGAGATTATTGCAGCTGCTAGAGATGTCCAGGAAAAGACCGAAATTTATGCACCTTTTAACATTCTTCCGTTGGATTCTGCCGGGGCTTCTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCCGCTGTTTCTGCGTTCTGGAATACCCGTGGCTTGAACTTCCCTAGTTCATTCGAGCAAACTCGCCAGAGGACTGGAGATTTGGATCTGCTTGATTGGCTCAGAGCCATGTTTGGGTTCCAGAAAGACAATGTCAGGAACCAGAGAGAGCATCTAATTCTGCTTCTTGCTAACAACCATATAAGGCTGCAACCCAAACCCGAGCCTCTCAACAAGCTTGATGACCGCGCAGTTGATTCAGTGATGAATCATCTCTTTAAGAATTACAAGACGTGGTGCAAATTTTTGGGACGAAAACATAGTTTACGACTTCCTCAAGGTCAGCAAGAGATACAGCAGAGGAAGCTGCTATATATGAGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATCTTCGCTTCATGCCAGAGTGCCTATGCTACATATTTCACAATATGGCATATGAACTTCATGGTTTATTGGCTGGAAATGTCAGCATTGTTACTGGTGAAAACATCAAACCTTCTTATGGTGGTGATGATGAGGCATTCTTGCGCAAAGTTATAACTCCGATCTACAAAGTCATCCAAACGGAAGCTGAGAAGAGCAAAGACGGGACGGCTCCTCACTCAGCCTGGTGCAATTATGATGATTTAAATGAGTATTTCTGGTCACCTGATTGCTTTTCTCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAAATCTACATTTAATTTCACACAGGGAAGAAAGGGTGCTCCGGCAAAATCTGCAAGAACTGGCAAATCAAATTTTGTAGAGACCCGGTCGTTCTGGAACCTCTTCCGTACTTTTGATCGTCTCTGGACCTTTTATTTACTGGGTTTGCAGGCATTGTTCATAGTTGCATGGGGAGATATTTCAGTGTTGGAAATATTTCGGAAAGATGTCTTATATAAACTCTCTAGCATATTCATCACAGCGGCCGCTCTTCGTTTCCTTCAAAGTATTTTGGACATGACTCTGAACTTTCCCGGCTTTCATCGCTGGAGATTCACCGATGTGCTAAGAAATGTTCTCAAAGTCATTGTTAGTCTTTTTTGGGTTATTGTTCTTCCATTATTGTACGTGCATTCCTTCGATGATTCTCCGGCATTTATCAAGAAGTTGCTTTCGTTTGTTCATCAAGTGAAAGGGATTCCACCATATTATGTCTTAGCAGTTGGAGTATATTTGATCCCAAATGTTCTAGCAGCCTTTCTCTTTCTTTTTCCAATGCTTAGGCGTTGGATTGAAAACTCAGACTGGCACATATTTAGACTCCTCTTATGGTGGTCACAGCCAAGAATCTATGTCGGGCGAGGAATGCATGAGAGTCAATTTGCTCTCTTTAAGTACACTCTTTTCTGGGTGCTTCTTTTGGCTGCCAAATTTTCATTCAGCTTTTTTGTCCAGATCAAGCCTCTTGTTAAGCCAACTAAAGACATAATGAGCATTCGACATGTTGATTATGGCTGGCATGAGTTTTTCCCAAATGCTCGAAATAATTATGGTGCAGTTGCTGCACTCTGGGCTCCTGTACTTATGGTTTATTTCATGGACACCCAAATTTGGTATTCCATCTTCTCAACTGTGTGTGGTGGTGTTCTTGGAGCCTTCGATCGTCTGGGAGAGATACGCACTCTGAGCATGCTCAGATCACGGTTTCAGTCATTACCCGGTGCATTCAACACTTACTTGGTTCCTACTGACAGGAGAAAGAAAAAGGGATTCTCTCTCTCAAAGGGATTTGCCGAGATTTCCGCAAACAGAAGGAGTGAAGCTGCTAAGTTTGCCCAATTATGGAACGAAATTATTTGCAGTTTCCGCGAGGAAGATATTATAAGTGATAGGAAAGGCCTCAAAGTCAAACTCTTTAGTTTCTTTTCTTTGGAGATGGACCTTTTGTTGGTTCCTTACTCATCGGATCCTAGCTTGAAAATAATTCAATGGCCACCATTTATGCTTGCAAGCAAGATTCCTATTGCACTGGATATGGCAGCTCAATTTCGAGGAAGGGACTGTGATCTTTGGAAACGCATATGTGCAGACGAATATATGAAATGTGCGGTCATTGAAAGCTATGAAACTTTCAAACATATTTTGAGCGCGTTAGTGGTCGGAGAAGCTGAAAAAAGGACAATCTCTGTCATCATAAAGGAAGTTGAAAACAGCATCTCTAAAAATACACTTCTTACAAATTTCCGAATGGGATTTTTGCCTTCCCTTTGCAAGAAATTTGTAGAGCTTGTTGAAATTTTGAAAGATGCAGATCTATCCAAGCGCGACACAGTGGTGGTATTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTGAATGAAATCAGCGAATTAGCAGAACTTAATCTAAGTAGCAAGGATACCGGAAGGCAACTTTTTGCTGGTACTGATGCAAAACCGGCCGTACTCTTCCCTCCAGTTGTTACATCACAATGGGAGGAACAGATTAGACGTCTTCACTTACTGTTGACGGTGAAGGAATCTGCCATTGAGATTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCTCTGTTCATGGATATGCCTCGTGCTCCTAGAGTTCGTAAAATGCTCTCGTTCAGTGTCATGACTCCATACTACAGCGAAGAGACTGTCTACTCAAAGAATGACCTTGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTACCTGCAGAAGATATACCCTGACGAGTGGAATAACTTCATGGAACGACTTGAATGTAAGAAAGATAGTGAAGTATGGGAAAGAGATGATAATATATTGCAGCTACGTCATTGGGCCTCACTACGAGGGCAAACACTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGTGCTCTTAAGCTCCAGGCTTTTCTTGATATGGCTAATGAAAAGGAGATACTTGATGGATATAAAGCTGTTACTGTTCCCTCTGAGGAAGATAAAAAGAGTCACAGATCACTATATGCCAGTTTAGAGGCTGTTGCTGACATGAAATTCACATACATTGCTACCTGTCAGAACTACGGAAATCAGAAGCGTAGTGGAGACCGTCGTGCAACAGACATTCTGAATTTGATGGTTAACAATCCTTCGCTTCGTGTGGCATATATTGATGAGGTTGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTACTCTGTATTGGTCAAAGCTGTGGACAATCATGACCAGGAAATATATAGAATAAAACTGCCAGGTCCAGCGAAGTTAGGAGAAGGGAAACCTGAAAATCAAAACCATGCAATCATTTTTACTAGAGGCGAAGCTCTTCAGGCTATTGACATGAACCAGGATAACTACTTGGAAGAAGCTTTAAAAATGCGTAATCTTCTGGAGGAATTTAATGAGGATCATGGGGTGCGCCGACCTACGATATTAGGTGTTCGTGAGCATATCTTCACTGGCAGTGTTTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTCGTCACAATTGGTCAAAGAGTTCTTGCAAGACCTCTGAAGGTACGATTTCACTATGGTCATCCAGATGTTTTTGATAGAATTTTTCACATTACCCGAGGAGGAATGAGTAAGGCTTCTCGTGGCATCCATTTGAGCGAGGATATTTTTGCCGGATTCAACTCAACACTACGACGCGGGAATATTACTCATCATGAATACATTCAAGTTGGAAAGGGTAGAGACGTTGGGCTCAATCAGATCTCTCTTTTTGAAGCAAAGGTGGCTTGCGGTAATGGAGAGCAAATACTAAGCAGAGATGTCTACAGGCTGGGGCATCGTTATGACTTTTTCCGCATGCTATCATTTTATTTTACGACCATTGGATTTTATACCAGCTCATTGATTGTGGTCCTTACGTCTTATGCCTTCCTATATGGAAAACTGTACCTGTCCTTAAGTGGATTTGAGGCTGCAATAGTGAAGTTTGCTAAGAGAAAGGGAGAGGATACGTTAATGGCGGCAATAGCTTCACAATCAATTGTTCAAATTGGACTTCTAACGACTTTGCCCATGGTCATGGAAATTGGACTAGAGAGAGGGTTCAGAACTGCTCTAGGTGACTTCATAATACTGCAGCTACAGCTGGCACCTGTTTTCTTTACTTTCTCGCTTGGAACGAAAATGCACTATTTTGGGCGCACTCTCCTGCATGGAGGGGCAAAGTACAGAGCAACTGGGCGTGGATTTGTCGTTCGTCATGAAAAGTTTGCAGACAATTACAGGATGTACTCTAGGAGTCACTTTGTCAAAGGGATTGAGCTCACAATATTGCTGATCTGTTACATGATTTATGGATCAGCAACACCTGACTCAGCAGCATACGCTCTTCTGTCATGGTCAATGTGGTTTTTGGTTTGCTCTTGGCTGTTTGCTCCTTTCCTTTTCAATCCATCAGGATTTGAGTGGCAAAAGATAGTTGAGGACTGGGATGATTGGACTAAATGGATTAGTAATCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAGTCATGGTGGGATGAGGAACAGGAGCATATGCAGCACACTGGCTTTATTGGTCGGATTTGTGAGATTCTTCTTTCCATGCGTTTCTTTATCTATCAGTATGGGATTGTGTATCATCTCAATGTAGCCAGAGGTGACAAGGGTATCATGGTTTATGCTCTGTCCTGGATAGTAATATTAGCTGTCATGGTTATCTTGAAGATTGTATCCATGGGTAGAAAGAGGTTCAGCGCAGATTTTCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTTATTGGAGCCGTTGTCTGCCTGGCCCTGATGTTTACTCTGCTTAGCCTCACTGTTGGAGACATCTTTGCCAGCCTTTTGGCCTTTTTGCCAACAGCATGGGCAATTATACAGATAGCACAAGCATGCAGACCATTGGTGAAAGGCATTGGAATGTGGGGGTCTGTTAAAGCCTTAGCTAGGGGCTACGAATACCTGATGGCAGTGATTATATTTACACCAGTGGCCATATTGGCATGGTTCCCATTTGTTTCAGAATTCCAAACTAGGCTTCTGTTCAACCAAGCATTCAGTCGAGGACTTCAAATCCAGCGTATTCTGGCCGGTGGCAAGAAACATAAGCAAAACTGA 5799 0.4277 MSNLEPATSQTLLRRPSRSAAMTTFSMEVFDNDVVVPSSLASITPILRVANEIESDRPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNANSLESRTKKTDAREIQAYYQQYYENYVKALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIAAARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSAFWNTRGLNFPSSFEQTRQRTGDLDLLDWLRAMFGFQKDNVRNQREHLILLLANNHIRLQPKPEPLNKLDDRAVDSVMNHLFKNYKTWCKFLGRKHSLRLPQGQQEIQQRKLLYMSLYLLIWGEASNLRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYKVIQTEAEKSKDGTAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFKSTFNFTQGRKGAPAKSARTGKSNFVETRSFWNLFRTFDRLWTFYLLGLQALFIVAWGDISVLEIFRKDVLYKLSSIFITAAALRFLQSILDMTLNFPGFHRWRFTDVLRNVLKVIVSLFWVIVLPLLYVHSFDDSPAFIKKLLSFVHQVKGIPPYYVLAVGVYLIPNVLAAFLFLFPMLRRWIENSDWHIFRLLLWWSQPRIYVGRGMHESQFALFKYTLFWVLLLAAKFSFSFFVQIKPLVKPTKDIMSIRHVDYGWHEFFPNARNNYGAVAALWAPVLMVYFMDTQIWYSIFSTVCGGVLGAFDRLGEIRTLSMLRSRFQSLPGAFNTYLVPTDRRKKKGFSLSKGFAEISANRRSEAAKFAQLWNEIICSFREEDIISDRKGLKVKLFSFFSLEMDLLLVPYSSDPSLKIIQWPPFMLASKIPIALDMAAQFRGRDCDLWKRICADEYMKCAVIESYETFKHILSALVVGEAEKRTISVIIKEVENSISKNTLLTNFRMGFLPSLCKKFVELVEILKDADLSKRDTVVVLLQDMLEVFTRDMMVNEISELAELNLSSKDTGRQLFAGTDAKPAVLFPPVVTSQWEEQIRRLHLLLTVKESAIEIPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVMTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLECKKDSEVWERDDNILQLRHWASLRGQTLCRTVRGMMYYRRALKLQAFLDMANEKEILDGYKAVTVPSEEDKKSHRSLYASLEAVADMKFTYIATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDNHDQEIYRIKLPGPAKLGEGKPENQNHAIIFTRGEALQAIDMNQDNYLEEALKMRNLLEEFNEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGMSKASRGIHLSEDIFAGFNSTLRRGNITHHEYIQVGKGRDVGLNQISLFEAKVACGNGEQILSRDVYRLGHRYDFFRMLSFYFTTIGFYTSSLIVVLTSYAFLYGKLYLSLSGFEAAIVKFAKRKGEDTLMAAIASQSIVQIGLLTTLPMVMEIGLERGFRTALGDFIILQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFADNYRMYSRSHFVKGIELTILLICYMIYGSATPDSAAYALLSWSMWFLVCSWLFAPFLFNPSGFEWQKIVEDWDDWTKWISNRGGIGVPSNKSWESWWDEEQEHMQHTGFIGRICEILLSMRFFIYQYGIVYHLNVARGDKGIMVYALSWIVILAVMVILKIVSMGRKRFSADFQLMFRLLKLFLFIGAVVCLALMFTLLSLTVGDIFASLLAFLPTAWAIIQIAQACRPLVKGIGMWGSVKALARGYEYLMAVIIFTPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHKQN 1932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g03191 1932 Gene3D - 29 190 IPR023175 -
Vifa2g03191 1932 Pfam 1,3-beta-glucan synthase component 1052 1746 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Vifa2g03191 1932 Pfam Vta1 like 42 170 IPR039431 -
Vifa2g03191 1932 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 935 948 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vifa2g03191 1932 SMART FKS1_dom1_2 322 438 IPR026899 -
Vifa2g03191 1932 Coils Coil 1328 1348 - -
Vifa2g03191 1932 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 101 1925 - -
Vifa2g03191 1932 FunFam callose synthase 3 27 185 - -
Vifa2g03191 1932 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 324 435 IPR026899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g03191 Vifa-Chr2 917343367 917356776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa2g03191 14 1932 Glycosyltransferase AT1G05570 59.754 0.0 2372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa2g03191 K11000 - gmx:100777245 3482.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g03191 2 917343367 917356776 Vifa6g03232 6 1071586084 1071587361 PCT