Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01765 ATGCTGCTGCATATATTTCCAAATTTGAGACACATCAATGTACTTCAAGGAAAAGGGTTGAGAGAATTTTTCAAAACGAGGATTAACTCGGGAGTTGATGGCATAAACGGTGAAAACAAGTGCTCTAATATAGGTTGCCTGGGAAGAAAACTGAGGCCAAAGATATCAGAAAGAAGTCTTGCATCAACTGTACCGGAGGAGATATATGCAATGTTAGATCAACCCCTTGACAAATACGAAATGGAGGGAAAATCGGATATTCCTCAGACTTTAGAAGAGTTCATGACTGAAATGAACAAAGGTGGATATGATGCCAAGACATTTGCGATTAAATTGAGAGAAATGGTAAACTTTATGCAACAAAGGACTAGGACCTCTAAAATCCAAGAATATTTATATCATCAAGTGGTATCGAACAGCATACCGAAGCACCTTCACTGTCTTGAAATGAGGCTGGCGAATGAGCACACGAACAATGCAGCGGCTCGCCTTCGGCTACCATCTTCAGAACTTTTTCCTGCTCTGGTTGACAATTCTTACTTCCACTTTGTTCTTGCCTCAGACAATGTGATTGCTGCCTCTGTGGTTACAAAATCACTTGTTCGCAACAGTTTGCACCCTTGGAAAGTTGTTCTACACATAATTACAGATAGAAAGACTTATCATTCCATGCAAGCTTGGTTTTCACTGCACTCTTTATCACCTGCTGTAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGAGGAAAGCGTCTGTTATAGAGGCAAAGGAAAAAAATCCAAATAAGCGATCAAAGTTTAGAAGAGGATCATCAGCTATAGTTGCAAATATGAATGAGAAGCCCAATGTTATTAAGGCACAACTGCGAACACGTGGTCCCAAGTATAGTTCAGTGATGAACCACATTCGGATACATCTTCCAGAGCTGTTCCCGAGTCTTGACAAGATGGTGTTCCTGGATGACGATATTGTGGTACAAACTGATCTTTCACCTCTATGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGTAAAGGGGGCGATAAATTCATGATGTCAAAGAGGTTAAAAAGCTATTTGAACTTCTCCAACCCTCTAATATCCAAATTTTTTGATCCAAATGAATGTCCTTGGGCTTATGGCATGAACATTTTTGACTTGAAGGCTTGGAGGAAGACCAATATAAGCAATACATACCACTATTGGGTTGAGCAGAATATAAGATCAAACATGAGTTTGTGGCAGTTAGGTACATTACCATTAATAGCATTCCATGGTAATGTGCATAAGATTGATCCTTTCTGGCACATGATGGGATTGGGATATAAGAAAAATACAAGTGTTGATGATGCTATGAATGCTGGGGTTGTTCATTTCAATGGAAGGGCAAAACCATGGCTAGATATAGGTTTTCCACAACTAAGGCCATTGTGGAGTAAGTATGTAAACTTTTCAGATAAATTCGTCAAAAGCTGTCACATGAGGGCATGGTAA 1518 0.3953 MLLHIFPNLRHINVLQGKGLREFFKTRINSGVDGINGENKCSNIGCLGRKLRPKISERSLASTVPEEIYAMLDQPLDKYEMEGKSDIPQTLEEFMTEMNKGGYDAKTFAIKLREMVNFMQQRTRTSKIQEYLYHQVVSNSIPKHLHCLEMRLANEHTNNAAARLRLPSSELFPALVDNSYFHFVLASDNVIAASVVTKSLVRNSLHPWKVVLHIITDRKTYHSMQAWFSLHSLSPAVIEVKALHHFDWFTKRKASVIEAKEKNPNKRSKFRRGSSAIVANMNEKPNVIKAQLRTRGPKYSSVMNHIRIHLPELFPSLDKMVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCKGGDKFMMSKRLKSYLNFSNPLISKFFDPNECPWAYGMNIFDLKAWRKTNISNTYHYWVEQNIRSNMSLWQLGTLPLIAFHGNVHKIDPFWHMMGLGYKKNTSVDDAMNAGVVHFNGRAKPWLDIGFPQLRPLWSKYVNFSDKFVKSCHMRAW 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01765 505 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 77 502 IPR029993 GO:0047262
Vifa6g01765 505 CDD GT8_like_1 181 491 - -
Vifa6g01765 505 SUPERFAMILY Nucleotide-diphospho-sugar transferases 182 501 IPR029044 -
Vifa6g01765 505 Pfam Glycosyl transferase family 8 180 477 IPR002495 GO:0016757
Vifa6g01765 505 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 183 497 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01765 Vifa-Chr6 673118816 673121441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01765 1 504 Glycosyltransferase AT5G54690 64.045 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01765 K20867 - gmx:100777811 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01765 6 673118816 673121441 Vifa6g01765 6 673118816 673121441 ECH
Vifa1g02644 1 416603649 416606531 Vifa6g01765 6 673118816 673121441 PCT