Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01763 ATGGGTGGTCAACAACAGCACAAAAAGTCCAAGGTTGTGAAAATAGACTCAATGAAATCATGGGAACAGAACATCACTGAAGCTACCAATAAAGGCTACTTTGTTATGGTTCATTTCTCTGCTTATTGGTGCATGCCTTCTTTTGCTATGGACCCTTTCTTTGAAGAATTGGCTTCCACCTATCAAGATGTAATCTTTCTCAAGGTGGATGTAGATGAGGTTAAGGAAGTAGCCACCAAGATGGAAATCAATGCCATGCCTACTTTTTTGTTGATGAGTGGAGGAACTCCTGTGGAGAAAACTGTTGGTGCGAATCCTGATGAATTAAGGAAAAGGATGGATCAACTCATTCCTCAAAATCCTTCTGATGCATGA 375 0.4053 MGGQQQHKKSKVVKIDSMKSWEQNITEATNKGYFVMVHFSAYWCMPSFAMDPFFEELASTYQDVIFLKVDVDEVKEVATKMEINAMPTFLLMSGGTPVEKTVGANPDELRKRMDQLIPQNPSDA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01763 124 SUPERFAMILY Thioredoxin-like 9 119 IPR036249 -
Vifa6g01763 124 Pfam Thioredoxin 16 114 IPR013766 -
Vifa6g01763 124 CDD TRX_family 19 114 - -
Vifa6g01763 124 Gene3D Glutaredoxin 2 121 - -
Vifa6g01763 124 PANTHER THIOREDOXIN 12 113 - -
Vifa6g01763 124 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01763 Vifa-Chr6 673103153 673104635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g01763 K03671 - gmx:100500083 185.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01763 6 673103153 673104635 Vifa6g01763 6 673103153 673104635 ECH
Vifa1g02653 1 417543990 417544943 Vifa6g01763 6 673103153 673104635 PCT