Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02653 ATGGAGAGCCAAGAATATAAAAAATCCAAAGTTATCAAAATAGACTCAAAAGAATCATGGGAACATTATATCTCTTATGCTACCAATCAAAATTACCCTGTTGTGGTTCATTTCTCTGCCTTTTGGTGTGTGCCATCTATAATTATGAATCCTTTCTTTCAAAAGCTTGCATCCAACTATCAAGATGTTTTGTTTCTGACAATGGATGTGGATGAGGTTAAGGAAATTTCCTCTAAGATGGAAATTAAAGCTATACCTACTTTTCTGTTATTGAGTGGAGGAACACCTGTGGACAAAATTGTGGGTGCAAATCCTGATGAAGTAAAGAGAAGAGTGGATCATTTTATTCAATCAACTTCATCCAACAAATCTATTGTGGAAACAATGAAATGA 393 0.3435 MESQEYKKSKVIKIDSKESWEHYISYATNQNYPVVVHFSAFWCVPSIIMNPFFQKLASNYQDVLFLTMDVDEVKEISSKMEIKAIPTFLLLSGGTPVDKIVGANPDEVKRRVDHFIQSTSSNKSIVETMK 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02653 130 Gene3D Glutaredoxin 1 124 - -
Vifa1g02653 130 ProSiteProfiles Thioredoxin domain profile. 1 117 IPR013766 -
Vifa1g02653 130 SUPERFAMILY Thioredoxin-like 7 117 IPR036249 -
Vifa1g02653 130 CDD TRX_family 33 113 - -
Vifa1g02653 130 PANTHER THIOREDOXIN 11 112 - -
Vifa1g02653 130 Pfam Thioredoxin 15 110 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02653 Vifa-Chr1 417543990 417544943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02653 K03671 - gmx:100813627 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02653 1 417543990 417544943 Vifa1g02653 1 417543990 417544943 ECH
Vifa1g02653 1 417543990 417544943 Vifa6g01763 6 673103153 673104635 PCT