Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00916 ATGGGGGTTATGTCGAGGCGGGTTGTGCCTGCCTGTGGCAACCTCTGTTGTGTTTGTCCGGCTCTCCGTGCTAGCTCGAGGCATCCCGTGAAGCGTTACAAGAAATTGTTGGCTGATATTTTCCCTCGCAATCAGGAGGCTGAACCCAATGATAGAAAAATTGGAAAGCTATGTGACTATGCATCTAAAAATCCGTTGAGGATTCCTAAGATTACTGATAGCTTGGAGCAAATGTGTTACAAGGATTTGCGTAATGAAGTATTTGGTTCAGTGAAAGTTGTCTTTTGTATCTACAGGAAACTCTTATCGTCATGTAAGGAGCAGATGTCACTTTTTGCGGGTAGTTTATTAGAGATTATTCGGACTCTTCTAGAACAAACTCGAATGGATGAAATCAGGATTTTAGGATGCAACACTCTTTCTGATTTTATAGATTGTCAGACAGATGGTTCATACATGTTCAACTTAGAGGGTTTTATTCCTAAGCTATGTCAATTGGCTCAAGAAATGGGGGAAGATGAACGCACTCTACGTCTCCGTTCAGCTGGATTACAAGCTCTATCCTATATGGTGCGTTTCATGGGTGAGCAATCACATCTTTCACTGGATTTGGATGAAATCATGCTAGTGACTTTAGAGAATTACACGAGTCTTCAATCTAACTCCAATCCCCCCAAAGAACATAAACTGAATTCAATGTCCATGGACCAGTTAGTACATGAATTTCCCAAAGAGGACTGCTCCTCGACAGATATCTCCAAGAAGGATTATTTGTGGCTGACACTCGTGGCAGGGGCTGGGATCGACTCTATGTTGGATACTGCTAAAGATCCAGCATATTGGTCAAAGGCTTGCTTATATAATATGGTCAAACTGGCAAAGGAAGCTACAACTTTGCGGCGTGTCCTTGAACCTCTTTTTCATTATTTTGATACTCAAAATCAATGGTCATCTGAAAAAGGAGAAGCTGCCCGTGTTTTGATGTATTTACAATCTATTTTAGAAGATTCAGGACATAACTCTTATCTTCTGTTGTCTATTTTGGTCAAGCACTTGGATCACAAGAATGTTTCCAAGCAGCCTATGCTTCAGATTAATATCACTAACACCACAACACAACTTGCACAAAATGTGAAGCAACATGCTTCAGTTGCAATAATTGGTGCAATATCTGACCTTGTTAAACACTTAAGGAAATGCCTACAAAATTTAGTTGCAGCTTCCAATATTGGGAATGACGAGTATAAGTTGAATACTGAACTTCAATCTGCCTTAGAAACATGTATATTACAACTTTCAAACAAGGTTGGGGATGTAGGGTCTGTCCTTGATTTGATGGCTGTGGTATTAGAGAATATCTCAACAACGACCATTGTAGCAAGAACAACCATCTATGCCATTTATCAAACTGTAAAGTTAGTTGCATCCATCCCTAATGTGTCATATCACAAGAAGGCTTTTCCTGATGCCTTGTTTCATCAATTGCTCCTGGTGATGGCTCATCCTGACCAAGAAACGCGAATTGGGGCACACTCTGTCTTTTCTACAGTGCTTTCCCCCCACTTAGACCATAAAAAAACGATGGCTCAGAATGTACCAAGTGAGAGCTTGTCCATTCAGCATAAAAGCTTTTTAGGGGCAGATCAGATGAATAGGAAACATATGGAAGGAAGGGCAGTAGTTGATGTCAGCAGTAGGATTCCATACCGTGTTTACAGCTTTTCTGGTGCTCTAAATCATGGGAATGATGAGCTAAGTTCCTTTCGGTTAAGCAGCCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATTTATGGACAATGCACCGGAAAATTTTGAGGCTATGGCTCACACTTTTAGCATTGCTTTATTGTTCACTCGTTCGAAGACATCCAGTTACACGGCTTTAGTAAGATGTTTCCAACTGGCATTCTCCCTCATGAGTATCTCATTGGACCAAGAAGGAGGTTTACAGCCATCTCGCAGGAGGTCTCTTCTTACCTTGGCATCATACATGCTTATATTCTCTGCCAGGACATGCAATTTCCCTGAGCTAATTCCAATAGTTAAAGCATCCCTGATACATTCAAATGTAGATCCTTTTCTTGAGTTGGTCGATGGTGTCAGGCTGCAGGCTGTTAATATAGAATCCGAGAAGATAATCTATGGATCTCAAGAAGATGATGTTGCTGCAATTGAGTTACTTTCGGCCGTAGAGTTGGATGATAAGCAGTTGAAAGAAACTGTAATCTCGTACTTCCTGACTAAATATTCAAAACTACCGGAGGATGAGTTATCAAGCATAAAGAAACAACTTGCACAGGGGTTTTCTCCCGATGATGCATATCCATCGGGACCTCCATTGTTTATTGAGACACCAAGTACATGTTCTCCGCATGCTCAGATTGAGTTTCCAGATTTTGACGAGATGGCTTCGGTAGCTTTGATGGATGAAGAGACTGGGCCTGAACCAAGTGGAAATAAGTCAGACTGCAAATCATCGCTATCTTTCAATAACCTGACCATTTTAAGTGTTAATCAACTCTTAGAATCGGTTTTGGAAACCGCACGGCAAGTCGCTAGTTTCCCCATTTCTGCAAATCCTGTACCATATGACCAAATGAAGAACCAGTGTCAGGCCCTTGTATCAGGGAAACAACAGAAAATGTCAGTTCTTCATGATTTTAAGCACCAACAGGATACTAGAGCGTTAATTCTTTCTAGTGCAAATGAAACAGAAGTGACCTCTCTACCAATTAAGACACTGGAGTATTCAGAAGTTGATCTGAAGCTAGTGAGCCAGGAGCAATTACAGGCGCTGTATCCAGTACACCCGTGTTCCTATGATTATAGGCAACAGCATTCTTTGCGACTACCACCGGCGAGCCCCTATGATAAATTCTTGAAAGCTGCTGGATGCTAA 2934 0.4151 MGVMSRRVVPACGNLCCVCPALRASSRHPVKRYKKLLADIFPRNQEAEPNDRKIGKLCDYASKNPLRIPKITDSLEQMCYKDLRNEVFGSVKVVFCIYRKLLSSCKEQMSLFAGSLLEIIRTLLEQTRMDEIRILGCNTLSDFIDCQTDGSYMFNLEGFIPKLCQLAQEMGEDERTLRLRSAGLQALSYMVRFMGEQSHLSLDLDEIMLVTLENYTSLQSNSNPPKEHKLNSMSMDQLVHEFPKEDCSSTDISKKDYLWLTLVAGAGIDSMLDTAKDPAYWSKACLYNMVKLAKEATTLRRVLEPLFHYFDTQNQWSSEKGEAARVLMYLQSILEDSGHNSYLLLSILVKHLDHKNVSKQPMLQINITNTTTQLAQNVKQHASVAIIGAISDLVKHLRKCLQNLVAASNIGNDEYKLNTELQSALETCILQLSNKVGDVGSVLDLMAVVLENISTTTIVARTTIYAIYQTVKLVASIPNVSYHKKAFPDALFHQLLLVMAHPDQETRIGAHSVFSTVLSPHLDHKKTMAQNVPSESLSIQHKSFLGADQMNRKHMEGRAVVDVSSRIPYRVYSFSGALNHGNDELSSFRLSSHQVSLLLSSIWVQATFMDNAPENFEAMAHTFSIALLFTRSKTSSYTALVRCFQLAFSLMSISLDQEGGLQPSRRRSLLTLASYMLIFSARTCNFPELIPIVKASLIHSNVDPFLELVDGVRLQAVNIESEKIIYGSQEDDVAAIELLSAVELDDKQLKETVISYFLTKYSKLPEDELSSIKKQLAQGFSPDDAYPSGPPLFIETPSTCSPHAQIEFPDFDEMASVALMDEETGPEPSGNKSDCKSSLSFNNLTILSVNQLLESVLETARQVASFPISANPVPYDQMKNQCQALVSGKQQKMSVLHDFKHQQDTRALILSSANETEVTSLPIKTLEYSEVDLKLVSQEQLQALYPVHPCSYDYRQQHSLRLPPASPYDKFLKAAGC 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00916 977 PANTHER PUTATIVE, EXPRESSED-RELATED 1 531 - -
Vifa6g00916 977 SUPERFAMILY ARM repeat 62 699 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00916 Vifa-Chr6 307563201 307570083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00916 K21842 - gmx:100817330 1489.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00894 1 151009564 151019496 Vifa6g00916 6 307563201 307570083 PCT