Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00894 ATGGGGGTTATGTCCAGGCGGGTTATCCCCGCCTGTGGTAGCCTCTGTGTTTTTTGTCCTTCTTTGCGGGCAAGATCGAGACAGCCGGTCAAACGTTACAAGAAGTTGATTGCTGAAATCTTACCACGGAATCAGGTTGCTGAACTCAATGATAGAAAAATCGGAAAGCTATGCGAATATGCTTCTAGGAATCCATTGAGAATTCCCAAGATTGCAGAGAACTTGGAGCAAAGATGTTACAAGGATTTGCGTAATGAAAGCTTTGGTTCAGTGAAAGTTATCTTGTGCATATACAGAAAATTGCTGTCGTCATGTAAGGAGCAGATACCACTATTTGCCAGTAGTTTATTAGGGATCATCCGGACTCTTTTTGAGCAAACTCGAGCAGATGAAGTGCGGATCTTAGGTTGCAATACTCTTGTAGATTTTATTAATTTCCAGACAGATGGTACATACATGTTCAACTTAGAAGGTTTTATCCCGAAATTATGTCAGTTGGCCCAAGAAGTGGGAGATGATGACCGAGCTCTGCTTCTACGCTCAGCAGGACTACAAGCTCTATCTTCTATGGTAAAGTTCATGGGTGAGCAATCACATCTTTCCATGGATTTTGACAAAATTATATCAGCAATTTTGGAGAATTGTATGGATCTCCAATCTAAATCCAACCTCGCCAGGGTAGAGAAACTGAATTTACAATCTCAGAACCAGATGGTTCAGGGATTTCTTAAAGAAGAAGACTGTATATCATCCACCTTGAATGTCACAACAGGATTTGAGATAGAGTCCAAGTTGGATACTGCTAAGAATCCTGCTTATTGGTCAATGGTTTGCTTGTACAATATAGCTAAATTGGCAAAGGAAGCTACTACTGTGCGGCGTGTCCTGGAACCTCTTTTTCATCATTTTGATTCAGAGAACCAATGGTCTTCGGAAAAAGGGGTTGCTTATTGTGTTTTGATGTATTTGCAATCCCTTTTAGCTGAATCAGGAAATAACTCCCATCTTCTGTTGTCCATTTTGGTCAAGCACTTGGATCATAAGAATGTTGCCAAGAAACCTATCCTTCAGATTGATATTATTAACACCACCACACAGGTTGCACAAAATGTGAAGCCGCAAGCCTCAGTTGCAATCATTGGTGCAATATCTGATCTCATTAAACATTTAAGGAAATGCCTACAAAATTCAGCTGAAGCATCCGATACTGAAAATGATGCATATAAGTTTAATACTAAATTTCAATCTGCCATTGAAATGTGCATATTACAACTTTCAAACAAGGTTGGAGATGCAGGACCCATTCTTGATTTGATGGCTGTGGTGCTAGAGAATATTTCTAGTTCTACTATCATAGCCAGAACAACAATCTCTGCTGTCCATCAGACTGCAAAGTTAATCACTTCCGTCCCTAACGTGTCGTATCACATGAAGGCTTTCCCTGATGCATTGTTTCATCAATTGCTCCTGACCATGGCTCATCCTGACCGTGAAACACAAATTGGAGCACACAGTATCTTCTCTATAGTGCTAATGCCATCCGTGTTTACTCCTTGGTTAGACCAAAAAAATATTGCTAAGAAGGTAGAGAATGACAGCCTCTCCATTCAGCATGAAAGTTTTTCTGGAGCAAAGCACTTGAATGGGAAACTGGTAGAAGAAAAGGATCTAAGATCTCTTAGGTTGAGCGGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGCTGAAAATGGCCCTGCAAATTATGAGGCAATGGCGCACACTTATAGCATTGCTTTATTATTTACTCGTACTAAGACATCCAGTTACATGGCTTTGGTAAGATGCTTTCAACTGGCATTTTCCCTCAAGAGCATATCTTTGGACCAAGAAGGAGGCTTACCACCATCTCGCAGGAGGTCCCTTTTAACCTTATCTTCATATATGCTTATATTCTCTGCCAGGGAAGGCAATTTCCCTGATCTGATTCCAAAAGTCAAAGTATCCCTCACAGAGGCACCAGTAGATCCATTTCTTGAACTGGTGGATGATACTCTGCTACGGGCTGTTTGTATAAAATCAGACAAGATAATTTATGGATCCGACGAAGATGAAGTTGCTGCTATGAAATCACTATCAACTGTACAATTGGATGACAGGCAGTTGAAAGAGACTGTAATATCATACTTTATGACTAAATTTTCGAAATTGCCAGAGGATGAGTTGTCCAGCATAAAAAATCAACTTCTACAGGGTTTTTCCCCTGATGATGCTTATCCTTCGGGACCTCCATTGTTTATGGAGACACCAAGACCAGGTTCTCCACTTGCTCAGATTGAGTTCCTAGATTTTGATGAGATAATGGCTCTAGATGATTCGATGGATGAAGAGACCGGGCCTGAGCTAAGTGGAAGCCAATCAGATCGCAGAACATCACTTTCAACCCACTTCCCTGATGTTGTAGGTGTTAATCAACTCTTGGAATCGGTTTTGGAAACTGCTCGGCAAGTTGCAAGCGTATCTACTTCCTCAACTCCGTTACCTTATGATCAAATGAAAGACCAGTGTGAGGCTCTTGTAACAGGGAAAAAACAGAAGATGTCAGCCATTCAAAGTTTTAAGCATCAACAAGAGACCAAAGCCATAGTTCTTTCAAGTGAAAATGAAGTAGAAGTTTCTCATCTACCGGCACTAGAATATTCAAAAGATGATTTGAAATTGGTGACCCAGGCACAATTAGCTCAGGATCAAATCTGCTTTCTTTCACACGACACTAGACAACAACATTCTTTGAGACTTCCACCTTCGAGCCCCTATGATAAATTCTTAAAAGCTGCAGGGTGCTAA 2844 0.4093 MGVMSRRVIPACGSLCVFCPSLRARSRQPVKRYKKLIAEILPRNQVAELNDRKIGKLCEYASRNPLRIPKIAENLEQRCYKDLRNESFGSVKVILCIYRKLLSSCKEQIPLFASSLLGIIRTLFEQTRADEVRILGCNTLVDFINFQTDGTYMFNLEGFIPKLCQLAQEVGDDDRALLLRSAGLQALSSMVKFMGEQSHLSMDFDKIISAILENCMDLQSKSNLARVEKLNLQSQNQMVQGFLKEEDCISSTLNVTTGFEIESKLDTAKNPAYWSMVCLYNIAKLAKEATTVRRVLEPLFHHFDSENQWSSEKGVAYCVLMYLQSLLAESGNNSHLLLSILVKHLDHKNVAKKPILQIDIINTTTQVAQNVKPQASVAIIGAISDLIKHLRKCLQNSAEASDTENDAYKFNTKFQSAIEMCILQLSNKVGDAGPILDLMAVVLENISSSTIIARTTISAVHQTAKLITSVPNVSYHMKAFPDALFHQLLLTMAHPDRETQIGAHSIFSIVLMPSVFTPWLDQKNIAKKVENDSLSIQHESFSGAKHLNGKLVEEKDLRSLRLSGHQVSLLLSSIWVQATSAENGPANYEAMAHTYSIALLFTRTKTSSYMALVRCFQLAFSLKSISLDQEGGLPPSRRRSLLTLSSYMLIFSAREGNFPDLIPKVKVSLTEAPVDPFLELVDDTLLRAVCIKSDKIIYGSDEDEVAAMKSLSTVQLDDRQLKETVISYFMTKFSKLPEDELSSIKNQLLQGFSPDDAYPSGPPLFMETPRPGSPLAQIEFLDFDEIMALDDSMDEETGPELSGSQSDRRTSLSTHFPDVVGVNQLLESVLETARQVASVSTSSTPLPYDQMKDQCEALVTGKKQKMSAIQSFKHQQETKAIVLSSENEVEVSHLPALEYSKDDLKLVTQAQLAQDQICFLSHDTRQQHSLRLPPSSPYDKFLKAAGC 947
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00894 947 SUPERFAMILY ARM repeat 75 508 IPR016024 -
Vifa1g00894 947 PANTHER PUTATIVE, EXPRESSED-RELATED 1 556 - -
Vifa1g00894 947 MobiDBLite consensus disorder prediction 798 812 - -
Vifa1g00894 947 MobiDBLite consensus disorder prediction 793 812 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00894 Vifa-Chr1 151009564 151019496 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00894 K21842 - gmx:100806860 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00894 1 151009564 151019496 Vifa1g00894 1 151009564 151019496 ECH
Vifa1g00894 1 151009564 151019496 Vifa6g00916 6 307563201 307570083 PCT