Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00637 ATGCATACCCCAAAAACAAGAAGTGGTTCTTCTGAAGTGACTCAGAAGGTTTCTGGACGCGCTGTACGCCAAATGAGGACTACTACAATAGACACGAACTCTATATCTTCTTCTTCGTCGTCTTCAACTCAAGTTAATAGATTATCAAAGGAAAGAAGCCCCAAACTCAATGATCGAAAATCACCCAGAAGCCCGGTTCCTGAGAGGAAACGTCCTAGCAAAATATCTGAATTGGAATCCCAAATTTCTCAACTTCAAGATGATTTGAAGAAGGTGATGGACCAGCTAGTTTTAACTGAATCAAGCAAGAAGCAAGCTCAGCAAGACGCCGAGGAATCCAAGGAGCAGCTCTTAACGCTATTTGCAAAACTCGAAGAATCTCAAAACCAATACTTGGAGCTTTGTGCTAACGGAGAAGCTCGTGATATTGAGCTCAGGAGACTGACCGAAGAACGCGACAGGGCATGGCAATCCGAGCTCGACGCGTCTGAAAAGAATCTTTCAGTTGACTCAACTGCTTTGGCTTCTGCAGTGAAGGAAATTCAGCTGCTAAAGGTACAGCTTGAGTTGGTAGCTAATTATGGTAGTGTTCAAACTCAACATGCTGAATCCGCGAATACGGAGCTACTAAACCTTAAGCAGAAGTTATCAGAATCTCTTTCTCTGATGGAGAGCATGAAAAACCAACTCGATAATTCCAAAGAGTCTGAAGTTCGGGCTCAAGTTGTTGTCGATGAAGCTTTGTTCCAACTCGAAGCTGCAAAAAGAACCGTCGAGATTCTAGCGGACGATGTTGTGAAAAATGTAGATGGCTACAATTCCATTGCTTTGGAATTAGAACATTCTAGAGCAAGGGTGAACACGCTAGAGACACTTGTTAGCAAACTTAAGACACAAGTAAAGGATAATGAGTCAATTCATTCTGATCAATGTCTTGTACACGATCCTGAATTCGAGAAGGAATGTGAAATAGTGAAAGACGGAGAGGATCCTAATCAAACTGAAATTGAGATTTGTTCTTTAAAATCCGAGGTTGAACGGTTGAGATCTGATATAGAGACTGCCGAGACTAAATATCAACAAGAACAGATTCAAAGCACGGTGCAGATAAAAGCCGCGTACGAGTTGATGGAGCAGATAAAATCTGAATCAGGTCATAGACAACGCGAGTTCGAGGCTGAATTACAAAGAAAGAAAGCGGATATTGAAGAATTGAAGGCTAATCTAATGGACAAAGAAACCGAGTTGCAATGTATCATGGAAGAGAACGAGAACTTGAATTTGCAGCTCGAAAATAACATGTCATCACAGAATGATAATGGACTTGAAAAGGAAGTTAAAAGATTGGAACAATGTTTGGATGAAATGAAAGCTGATATGATGGACAAGGAAACAACACTGCAAAGCTTATCAGAAGAGAACGCGACGCTGAAGATGGAGATCAGCAAGCGCTATTCGGATGGTGTAAATGCGAGAGAGGAAATAGAGAAAGTTAAGGCTGCTGAACGCGAGGTGGCAACAAAACTCGGGATTGCGATGGAGGAAGCAGACAGAAGCAGCCGAAAGGCCGCGAGAGTGACAGAACAGTTAGAAGCAGCGCAAGCGGCTAGCTTAGAAATGGAAAGCGAACTGCGGAAGCTTATGGTACAATCTGATCAATGGAGGAAGGCTGCAGAAGCGGCCGCTGCTATGCTTTCGGCCGGGAACAATGAGAAGATTACAGAGAGAGGTGTGTCTTTGGAGAAAAACTATAAGTGTTCACCACCTTATGGTGAAGATATTGATGATGAGTTTCAGAGAAAGAAAAATGGGAACATGTTGAAGAAGATTGGAGTCTTGTGGAAGAAGCCTCAAAAATAG 1860 0.4258 MHTPKTRSGSSEVTQKVSGRAVRQMRTTTIDTNSISSSSSSSTQVNRLSKERSPKLNDRKSPRSPVPERKRPSKISELESQISQLQDDLKKVMDQLVLTESSKKQAQQDAEESKEQLLTLFAKLEESQNQYLELCANGEARDIELRRLTEERDRAWQSELDASEKNLSVDSTALASAVKEIQLLKVQLELVANYGSVQTQHAESANTELLNLKQKLSESLSLMESMKNQLDNSKESEVRAQVVVDEALFQLEAAKRTVEILADDVVKNVDGYNSIALELEHSRARVNTLETLVSKLKTQVKDNESIHSDQCLVHDPEFEKECEIVKDGEDPNQTEIEICSLKSEVERLRSDIETAETKYQQEQIQSTVQIKAAYELMEQIKSESGHRQREFEAELQRKKADIEELKANLMDKETELQCIMEENENLNLQLENNMSSQNDNGLEKEVKRLEQCLDEMKADMMDKETTLQSLSEENATLKMEISKRYSDGVNAREEIEKVKAAEREVATKLGIAMEEADRSSRKAARVTEQLEAAQAASLEMESELRKLMVQSDQWRKAAEAAAAMLSAGNNEKITERGVSLEKNYKCSPPYGEDIDDEFQRKKNGNMLKKIGVLWKKPQK 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00637 619 Coils Coil 516 550 - -
Vifa6g00637 619 Coils Coil 345 365 - -
Vifa6g00637 619 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 619 IPR029688 -
Vifa6g00637 619 Coils Coil 388 480 - -
Vifa6g00637 619 MobiDBLite consensus disorder prediction 51 76 - -
Vifa6g00637 619 Coils Coil 279 299 - -
Vifa6g00637 619 Coils Coil 75 130 - -
Vifa6g00637 619 MobiDBLite consensus disorder prediction 1 50 - -
Vifa6g00637 619 MobiDBLite consensus disorder prediction 1 76 - -
Vifa6g00637 619 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00637 Vifa-Chr6 242120888 242123480 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00637 - - mtr:25494426 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01471 1 241104265 241105419 Vifa6g00637 6 242120888 242123480 PCT