Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01471 ATGAAAAACAAGCTCCAAGATTGCAAAGAGTCGGTCCAGGCTCAACCTTTGGTGAATGAGACTCTGCGACAGCTCGAGGCAGCAAAAAGAACGGTTGAGTTCTTGAGATCAGACGCTGCAAAAGCTGGGCATGGATACAACTCTTCTGCTTTAGAGTTAGACAAGTCTAGAACTCGCGTGATGTCACATGACAGTAATTTGGAAATAGAAGCAGAAAGATTGGGAAAGGGAGATAGTACTAATCATATTGAAATCGAGTTTCGTTCTTTGAGATCTGAGGTTGAATTACTTAGGTCGGCGATTGAGATTGCCGAGACTAAATTCCAGGAAGAACAGATTCAGAATACAGTAAAGATTAGGAATGCTTACGAGTTCATCGAACGGATAAAATCCGAATCTAGTCAGAGGGAATTAGAACTGAAAAGAGAGAAAACTGAAATTGAGGAGTTGAAGGAGAAATTGTTGGATAAGGAAAATGAGTTGCAAGGTATTGTAGAAGAGAATGAGGAGTTGAAATCGAAGCTTGAAAAAAGCGTTTCGTTATCAACGAAGAAGGAACGCGAACTTAAGGAGGAACTTAGAAGGTTAGACGAATGCGTGGCGGTAATGAAGGGCGAAATGATGGATAAAGAAACAACATTGCAAAGTATATCAGAAGAGAATGAAATTCTGAAGTTGGAAATCAATAAGAGGTTCACATTCTCACATGTTGGTATGATGAGTGATCAAGTTGCAGCCGAGATAGGGGCGGCCAAGGCTGCAGAACGCGACGCTTTTGCAAAACTTAAGATAATGATTGAGGAGGTAGATAGGAGCAATAATAAGGCTGCAAGAGTGACTGAGATGCTCGAGGCAGCACAAGCGGCGAATGCAGAAAAAGAAGCTGAATTGAAGAGAATCAAAGTGCAATGTGATCAGTGGAGGAAGGCTGCCGAGACAGCTGCTGCTATGTTCTCGACAGGGAACAATGGAAACATCGCGGAGAGATCAATGTCTATGGACAACAACTACAACAGCAATGTGATGAAGAGTAATAAGTACTCAAACTTTTATGAAGAGATTGATGATTGGAGTGATTTACAAAGAAAGAAAAATGGGAATGTGTTGAAAAAGTTTGGTGACTTGTGGAAAAAGCCTCAGAAAATCAATGGTTGA 1155 0.4113 MKNKLQDCKESVQAQPLVNETLRQLEAAKRTVEFLRSDAAKAGHGYNSSALELDKSRTRVMSHDSNLEIEAERLGKGDSTNHIEIEFRSLRSEVELLRSAIEIAETKFQEEQIQNTVKIRNAYEFIERIKSESSQRELELKREKTEIEELKEKLLDKENELQGIVEENEELKSKLEKSVSLSTKKERELKEELRRLDECVAVMKGEMMDKETTLQSISEENEILKLEINKRFTFSHVGMMSDQVAAEIGAAKAAERDAFAKLKIMIEEVDRSNNKAARVTEMLEAAQAANAEKEAELKRIKVQCDQWRKAAETAAAMFSTGNNGNIAERSMSMDNNYNSNVMKSNKYSNFYEEIDDWSDLQRKKNGNVLKKFGDLWKKPQKING 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01471 384 Coils Coil 87 107 - -
Vifa1g01471 384 Coils Coil 133 174 - -
Vifa1g01471 384 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 381 IPR029688 -
Vifa1g01471 384 Coils Coil 18 38 - -
Vifa1g01471 384 Coils Coil 207 227 - -
Vifa1g01471 384 Coils Coil 269 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01471 Vifa-Chr1 241104265 241105419 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01471 - - tpra:123893984 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01471 1 241104265 241105419 Vifa1g01471 1 241104265 241105419 ECH
Vifa1g01471 1 241104265 241105419 Vifa6g00637 6 242120888 242123480 PCT