Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00584 ATGTTCTGGAAACTTCCATCCATATCCGCTTCCTCTCCGGTCGAGGTAGTATTGGACAAGGAGTACTACACTTTGGAAGAGCTTCTGGATGAAGAGGAAATAATCCAGGAATGCAAGGCCTTGAACAGTCGTCTCATTAACTTTTTGAGAGATAAAGAGCAGGTTGAGCAATTGCTTCGCTACATTATTGAAGAACCACCAATTGATGCTGAAAACAAACGGGTCTTCAAGTTTCCGTTCATGGCCTGTGAGATCTTTACATGTGAAATTGATGTCATTTTAAAGACCTTGGTGGATGAAGAAGAGCTCATGAACTTATTGTTCTCCTTCCTGGAGCCTGACCGTTCTCATAGTACCTTGCTGGCTGGGTACTTCAGCAAGGTTGTTGTTACTCTAATGATCCGGAAGACAGCACAGCTTATCAGTTATGTTCAAGCCCATCAGCATGTGTTTCGCCAACTGGTTGATTTGATAGGCATTACATCCATCATGGAGGTTTTGGTTCGACTAGTCGGTGCTGATGATCATGCATATCCCAATTTTATAGAAGTGATGCAATGGTTGGCTGAGAGCAATCTGCTAGAGATGATTGTTGATAAATTAAGTCCCTCGAGTCCCCCTGAAGTTCATGCCAATGTAGCTGAAACATTATGTACAATAACTCGAGTTCCATCATCCACTTTAGCAATTAAGCTTTCAAGTCCAAGTTTTGTTGCAAAAATTTTGGATTACGCATTGGACAATTCACAATCAAAGTCTAGTCTTGTCAACTCACTCTGTGTGTGTATTTCTTTACTGGATCCCAAAAAATCAGCTGTTTCATCTTCACTTTTTCATTCATTCCGAAGTCAAAACATGTATGAGCCACCAATTCCTGTAAATCCGGATACTATTGGTGCAATGCTCCCTAAACTGGGGGATTTGCTTGTGCTTTTGAATGTGTCATCCGACGACAAGGTATTGCCTACAACATACGGTGAACTGAGACCTCCACTTGGCAAGCATCGATTGAAGATCGTGGAGTTCATTGCAGAACTTTTAAAAATCAGAAATGAAGTGGCAGATAAAGAATTGGTCAACTCGGGAACCATTGGACGAATTGTTGACCTTTTTTTTGAGTATCCGTTCAATAACTCGTTACACCATCACATTGAAAGTATCATATTATCATGTTTGGAGAGCAAAGCTGATGCCATTGTTGATTATCTTCTCCAAGGTTGTGATTTAATTGGGAGGTTTCTCCAAGTAGATAAACAATGTGTTCTTTCTGCTGAAGGCAATCAGCGAACAATACCTGCGGATGGAAAACGGGCGACCCGGGCGGGAAACATTGGACATATTACTCGAATTGCTAATAAACTCGTTCACTTGGCTCATAACCAAAGCCACATTCTAGCACGTCTTCAGGAGAACCATGAGTGGAATGAATGGCAAGCTACAGTTCTTGAGGAGCGGAATAAGGTTGAGAATGTTAATCGCTGGGCTTGTGGACGTCCAACTGCATTGCAAGATAGGATGAGGGATAGTGATGACGATGAAATTCATGACAGAGACTATGATGTTACATCATTAGCAAATAATTTGAGCCAGGCTTTTGGATACAAAATTTATGGAAATGAGGACAATGAAGAGGAGCATGGTGGTGTTGAGCGAGATGATGAGGACGTGTACTTTGATGATGATTCTGCTGAGGTAGTCATATCTTCCCTTAGACTTGGTGATGATCAAGGGAGTAATCTGTTTACAAACTCCAACTGGTTTGCTTTCCAAGATGACAGAATTGGTGATGCAAATGGGGGAACATCATCGTCTGAGATGATGGATGAGATAAACTTTAATGGAGCTGCAAATGGCGGTAGCAACAGTAGTGATGATGATGATGATGAGGTGGTGGTTGGAGAGGATGAAGAATTGACTGACAGCAAAGATACTGTGAATGATTTTGAAAGTGAGAAAGCAAGCACTTCGCATGACATGGGATTCTACAAATTTGAGGCAACAGACAATGAGGACTTGTTTGGTGATAGACCTTTACCAGATTGGGTGGGATGGAGTGAGCCATCAGATATACAAGTGGCTAGCTCAAGTATGAATCCTTTTCTGGATCATAGTGAACCAGGCAGTAATTTGGCTAGTAAGTCTCAATTAGGCGATCAGAATCCGAATTCTTCAAATGGGGAACCTGTGCTATCAAATGGGTCACCAATTACTAGAGATTCAATGGATGCGGATGAGGACTCAAGTCAAAGATCGGTATCCGTACCCTCTTTATTTGAAGATGATGTGGAGTTTGTGGGTGTAGAGTTAGAAGGCACCGGTAATGCAATGGAACGGGCCCTAAAAGAAGGGATAGTTGGGGAAGCAGGGCCATTAAAAAGAAATGTATCCCCGAAAGGGCCAGAAAAAGAAAATTCTGAAGAAGGTAGTCCTGGTGTGAAGGAGTTCAATGATACAAATTATTGGAGGGTTGACCAAGAGGTTGCTGTTCTAGAGTAA 2496 0.4195 MFWKLPSISASSPVEVVLDKEYYTLEELLDEEEIIQECKALNSRLINFLRDKEQVEQLLRYIIEEPPIDAENKRVFKFPFMACEIFTCEIDVILKTLVDEEELMNLLFSFLEPDRSHSTLLAGYFSKVVVTLMIRKTAQLISYVQAHQHVFRQLVDLIGITSIMEVLVRLVGADDHAYPNFIEVMQWLAESNLLEMIVDKLSPSSPPEVHANVAETLCTITRVPSSTLAIKLSSPSFVAKILDYALDNSQSKSSLVNSLCVCISLLDPKKSAVSSSLFHSFRSQNMYEPPIPVNPDTIGAMLPKLGDLLVLLNVSSDDKVLPTTYGELRPPLGKHRLKIVEFIAELLKIRNEVADKELVNSGTIGRIVDLFFEYPFNNSLHHHIESIILSCLESKADAIVDYLLQGCDLIGRFLQVDKQCVLSAEGNQRTIPADGKRATRAGNIGHITRIANKLVHLAHNQSHILARLQENHEWNEWQATVLEERNKVENVNRWACGRPTALQDRMRDSDDDEIHDRDYDVTSLANNLSQAFGYKIYGNEDNEEEHGGVERDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDRIGDANGGTSSSEMMDEINFNGAANGGSNSSDDDDDEVVVGEDEELTDSKDTVNDFESEKASTSHDMGFYKFEATDNEDLFGDRPLPDWVGWSEPSDIQVASSSMNPFLDHSEPGSNLASKSQLGDQNPNSSNGEPVLSNGSPITRDSMDADEDSSQRSVSVPSLFEDDVEFVGVELEGTGNAMERALKEGIVGEAGPLKRNVSPKGPEKENSEEGSPGVKEFNDTNYWRVDQEVAVLE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00584 831 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 794 IPR007587 GO:0019903|GO:0043666
Vifa6g00584 831 Pfam SIT4 phosphatase-associated protein 131 354 IPR007587 GO:0019903|GO:0043666
Vifa6g00584 831 Pfam SIT4 phosphatase-associated protein 357 491 IPR007587 GO:0019903|GO:0043666
Vifa6g00584 831 MobiDBLite consensus disorder prediction 622 636 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 786 819 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 696 757 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 598 621 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 637 652 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 696 738 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 598 652 - -
Vifa6g00584 831 MobiDBLite consensus disorder prediction 796 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00584 Vifa-Chr6 228137402 228146186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00584 K15501 - psat:127108422 1474.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01356 1 220724614 220732743 Vifa6g00584 6 228137402 228146186 PCT